Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RFX1P22670 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.94■□□□□ 0.46
RFX1P22670 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RFX1P22670 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.94■□□□□ 0.46
RFX1P22670 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.94■□□□□ 0.46
RFX1P22670 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RFX1P22670 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.93■□□□□ 0.46
RFX1P22670 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RFX1P22670 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.93■□□□□ 0.46
RFX1P22670 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.93■□□□□ 0.46
RFX1P22670 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RFX1P22670 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.93■□□□□ 0.46
RFX1P22670 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.93■□□□□ 0.46
RFX1P22670 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RFX1P22670 AC069262.1-201ENST00000539058 672 ntBASIC17.93■□□□□ 0.46
RFX1P22670 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 AC190387.1-201ENST00000551683 408 ntBASIC17.93■□□□□ 0.46
RFX1P22670 AC096734.2-201ENST00000562054 433 ntBASIC17.93■□□□□ 0.46
RFX1P22670 AC138761.1-201ENST00000584393 385 ntBASIC17.93■□□□□ 0.46
RFX1P22670 AC023141.13-201ENST00000604991 943 ntBASIC17.93■□□□□ 0.46
RFX1P22670 ACTL9-202ENST00000612068 1252 ntBASIC17.93■□□□□ 0.46
RFX1P22670 AC091812.2-201ENST00000619081 385 ntBASIC17.93■□□□□ 0.46
RFX1P22670 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.93■□□□□ 0.46
RFX1P22670 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
RFX1P22670 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.93■□□□□ 0.46
RFX1P22670 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.93■□□□□ 0.46
RFX1P22670 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX1P22670 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RFX1P22670 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX1P22670 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.92■□□□□ 0.46
RFX1P22670 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX1P22670 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX1P22670 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX1P22670 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX1P22670 AC025580.3-201ENST00000617932 1424 ntBASIC17.92■□□□□ 0.46
RFX1P22670 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX1P22670 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX1P22670 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX1P22670 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RFX1P22670 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX1P22670 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.92■□□□□ 0.46
RFX1P22670 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.92■□□□□ 0.46
RFX1P22670 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX1P22670 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX1P22670 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX1P22670 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.92■□□□□ 0.46
RFX1P22670 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.92■□□□□ 0.46
RFX1P22670 MIR4515-201ENST00000584082 81 ntBASIC17.92■□□□□ 0.46
RFX1P22670 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX1P22670 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX1P22670 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX1P22670 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.92■□□□□ 0.46
RFX1P22670 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX1P22670 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX1P22670 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX1P22670 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX1P22670 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX1P22670 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
RFX1P22670 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RFX1P22670 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.91■□□□□ 0.46
RFX1P22670 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RFX1P22670 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX1P22670 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX1P22670 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.91■□□□□ 0.46
RFX1P22670 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX1P22670 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX1P22670 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.91■□□□□ 0.46
RFX1P22670 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
RFX1P22670 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.91■□□□□ 0.46
RFX1P22670 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX1P22670 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX1P22670 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX1P22670 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX1P22670 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX1P22670 AL139400.1-201ENST00000366220 510 ntBASIC17.91■□□□□ 0.46
RFX1P22670 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.91■□□□□ 0.46
RFX1P22670 CXCL1P1-201ENST00000502804 216 ntBASIC17.91■□□□□ 0.46
RFX1P22670 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.91■□□□□ 0.46
RFX1P22670 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.91■□□□□ 0.46
RFX1P22670 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms