Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LCP1P13796 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LCP1P13796 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LCP1P13796 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LCP1P13796 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
LCP1P13796 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.34■□□□□ 0.37
LCP1P13796 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.34■□□□□ 0.37
LCP1P13796 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.34■□□□□ 0.37
LCP1P13796 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.34■□□□□ 0.37
LCP1P13796 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LCP1P13796 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.34■□□□□ 0.37
LCP1P13796 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.34■□□□□ 0.37
LCP1P13796 UXT-AS1-201ENST00000590504 1525 ntBASIC17.34■□□□□ 0.37
LCP1P13796 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 AL513210.1-201ENST00000629608 234 ntBASIC17.34■□□□□ 0.37
LCP1P13796 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LCP1P13796 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.34■□□□□ 0.37
LCP1P13796 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LCP1P13796 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LCP1P13796 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCP1P13796 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
LCP1P13796 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LCP1P13796 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.33■□□□□ 0.37
LCP1P13796 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCP1P13796 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.33■□□□□ 0.37
LCP1P13796 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCP1P13796 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCP1P13796 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
LCP1P13796 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
LCP1P13796 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCP1P13796 AC005622.1-201ENST00000636801 1703 ntBASIC17.33■□□□□ 0.37
LCP1P13796 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCP1P13796 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LCP1P13796 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCP1P13796 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.33■□□□□ 0.37
LCP1P13796 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
LCP1P13796 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LCP1P13796 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
LCP1P13796 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.33■□□□□ 0.36
LCP1P13796 CNN2P11-201ENST00000429351 262 ntBASIC17.33■□□□□ 0.36
LCP1P13796 AC005237.2-201ENST00000434368 219 ntBASIC17.33■□□□□ 0.36
LCP1P13796 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.33■□□□□ 0.36
LCP1P13796 AP006288.1-201ENST00000446065 395 ntBASIC17.33■□□□□ 0.36
LCP1P13796 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LCP1P13796 AP000344.2-201ENST00000512987 629 ntBASIC17.33■□□□□ 0.36
LCP1P13796 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.33■□□□□ 0.36
LCP1P13796 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.33■□□□□ 0.36
LCP1P13796 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LCP1P13796 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LCP1P13796 GPALPP1-207ENST00000611650 899 ntBASIC17.33■□□□□ 0.36
LCP1P13796 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.33■□□□□ 0.36
LCP1P13796 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.33■□□□□ 0.36
LCP1P13796 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCP1P13796 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.32■□□□□ 0.36
LCP1P13796 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.32■□□□□ 0.36
LCP1P13796 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.32■□□□□ 0.36
LCP1P13796 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCP1P13796 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCP1P13796 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCP1P13796 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.32■□□□□ 0.36
LCP1P13796 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCP1P13796 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCP1P13796 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCP1P13796 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCP1P13796 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCP1P13796 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCP1P13796 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCP1P13796 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LCP1P13796 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms