Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.06■□□□□ 0.32
CD48P09326 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.06■□□□□ 0.32
CD48P09326 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.06■□□□□ 0.32
CD48P09326 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.06■□□□□ 0.32
CD48P09326 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.06■□□□□ 0.32
CD48P09326 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CD48P09326 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.06■□□□□ 0.32
CD48P09326 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CD48P09326 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CD48P09326 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.06■□□□□ 0.32
CD48P09326 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CD48P09326 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CD48P09326 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.06■□□□□ 0.32
CD48P09326 MED15P5-201ENST00000423150 992 ntBASIC17.06■□□□□ 0.32
CD48P09326 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.06■□□□□ 0.32
CD48P09326 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.06■□□□□ 0.32
CD48P09326 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
CD48P09326 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
CD48P09326 PDPK2P-202ENST00000562415 1191 ntBASIC17.06■□□□□ 0.32
CD48P09326 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.06■□□□□ 0.32
CD48P09326 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.06■□□□□ 0.32
CD48P09326 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.06■□□□□ 0.32
CD48P09326 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CD48P09326 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.06■□□□□ 0.32
CD48P09326 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CD48P09326 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD48P09326 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CD48P09326 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CD48P09326 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CD48P09326 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.05■□□□□ 0.32
CD48P09326 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.05■□□□□ 0.32
CD48P09326 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.05■□□□□ 0.32
CD48P09326 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CD48P09326 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.05■□□□□ 0.32
CD48P09326 KRT18P3-201ENST00000451602 1288 ntBASIC17.05■□□□□ 0.32
CD48P09326 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.05■□□□□ 0.32
CD48P09326 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.05■□□□□ 0.32
CD48P09326 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.05■□□□□ 0.32
CD48P09326 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.05■□□□□ 0.32
CD48P09326 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CD48P09326 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CD48P09326 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.05■□□□□ 0.32
CD48P09326 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CD48P09326 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CD48P09326 AL592424.1-201ENST00000563624 1536 ntBASIC17.05■□□□□ 0.32
CD48P09326 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.05■□□□□ 0.32
CD48P09326 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CD48P09326 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.05■□□□□ 0.32
CD48P09326 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.05■□□□□ 0.32
CD48P09326 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD48P09326 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.04■□□□□ 0.32
CD48P09326 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CD48P09326 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.04■□□□□ 0.32
CD48P09326 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CD48P09326 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.04■□□□□ 0.32
CD48P09326 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.04■□□□□ 0.32
CD48P09326 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms