Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 AC007950.2-201ENST00000615045 2347 ntBASIC14.41□□□□□ -0.1
SFTPBP07988 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SFTPBP07988 CYP2T1P-202ENST00000641596 2535 ntBASIC14.41□□□□□ -0.1
SFTPBP07988 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.41□□□□□ -0.1
SFTPBP07988 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SFTPBP07988 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SFTPBP07988 AL590627.1-203ENST00000421194 1026 ntBASIC14.41□□□□□ -0.1
SFTPBP07988 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SFTPBP07988 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.41□□□□□ -0.1
SFTPBP07988 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.41□□□□□ -0.1
SFTPBP07988 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.41□□□□□ -0.1
SFTPBP07988 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.41□□□□□ -0.1
SFTPBP07988 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 MIR7706-201ENST00000613747 67 ntBASIC14.41□□□□□ -0.1
SFTPBP07988 FAM215A-202ENST00000632077 792 ntBASIC14.41□□□□□ -0.1
SFTPBP07988 AL022326.1-202ENST00000641533 845 ntBASIC14.41□□□□□ -0.1
SFTPBP07988 AL021920.2-201ENST00000624828 1351 ntBASIC14.41□□□□□ -0.1
SFTPBP07988 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SFTPBP07988 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SFTPBP07988 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SFTPBP07988 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SFTPBP07988 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SFTPBP07988 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.41□□□□□ -0.1
SFTPBP07988 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.41□□□□□ -0.1
SFTPBP07988 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.41□□□□□ -0.1
SFTPBP07988 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 AL513523.2-202ENST00000427283 2040 ntBASIC14.41□□□□□ -0.1
SFTPBP07988 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SFTPBP07988 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SFTPBP07988 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.4□□□□□ -0.1
SFTPBP07988 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 AC092364.2-201ENST00000596710 2692 ntBASIC14.4□□□□□ -0.1
SFTPBP07988 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
SFTPBP07988 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.4□□□□□ -0.1
SFTPBP07988 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.4□□□□□ -0.1
SFTPBP07988 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.4□□□□□ -0.1
SFTPBP07988 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.4□□□□□ -0.1
SFTPBP07988 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
SFTPBP07988 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SFTPBP07988 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SFTPBP07988 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.4□□□□□ -0.1
SFTPBP07988 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SFTPBP07988 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.4□□□□□ -0.1
SFTPBP07988 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 AC093909.1-201ENST00000504731 1122 ntBASIC14.4□□□□□ -0.1
SFTPBP07988 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.4□□□□□ -0.1
SFTPBP07988 MTDHP4-201ENST00000600287 670 ntBASIC14.4□□□□□ -0.1
SFTPBP07988 AC025062.2-201ENST00000605477 670 ntBASIC14.4□□□□□ -0.1
SFTPBP07988 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
SFTPBP07988 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.4□□□□□ -0.1
SFTPBP07988 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SFTPBP07988 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.4□□□□□ -0.1
SFTPBP07988 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.4□□□□□ -0.1
SFTPBP07988 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SFTPBP07988 NCF1C-201ENST00000438382 1427 ntBASIC14.4□□□□□ -0.1
SFTPBP07988 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SFTPBP07988 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.11
SFTPBP07988 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms