Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.82■□□□□ 0.6
TPM2P07951 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.82■□□□□ 0.6
TPM2P07951 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
TPM2P07951 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TPM2P07951 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TPM2P07951 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.82■□□□□ 0.6
TPM2P07951 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC18.82■□□□□ 0.6
TPM2P07951 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC18.82■□□□□ 0.6
TPM2P07951 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM2P07951 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TPM2P07951 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
TPM2P07951 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.81■□□□□ 0.6
TPM2P07951 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM2P07951 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM2P07951 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM2P07951 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM2P07951 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM2P07951 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.81■□□□□ 0.6
TPM2P07951 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM2P07951 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TPM2P07951 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.81■□□□□ 0.6
TPM2P07951 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TPM2P07951 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.81■□□□□ 0.6
TPM2P07951 SIGLEC30P-201ENST00000455569 941 ntBASIC18.81■□□□□ 0.6
TPM2P07951 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.81■□□□□ 0.6
TPM2P07951 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.81■□□□□ 0.6
TPM2P07951 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TPM2P07951 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TPM2P07951 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.81■□□□□ 0.6
TPM2P07951 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.81■□□□□ 0.6
TPM2P07951 AC139749.1-202ENST00000617529 3139 ntBASIC18.81■□□□□ 0.6
TPM2P07951 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM2P07951 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.81■□□□□ 0.6
TPM2P07951 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TPM2P07951 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TPM2P07951 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.81■□□□□ 0.6
TPM2P07951 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM2P07951 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TPM2P07951 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.81■□□□□ 0.6
TPM2P07951 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.81■□□□□ 0.6
TPM2P07951 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM2P07951 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TPM2P07951 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM2P07951 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TPM2P07951 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM2P07951 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.8■□□□□ 0.6
TPM2P07951 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM2P07951 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM2P07951 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
TPM2P07951 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM2P07951 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM2P07951 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM2P07951 AC096582.2-201ENST00000510860 516 ntBASIC18.8■□□□□ 0.6
TPM2P07951 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.8■□□□□ 0.6
TPM2P07951 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM2P07951 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TPM2P07951 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 MIR600HG-201ENST00000449175 5984 ntBASIC18.8■□□□□ 0.6
TPM2P07951 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM2P07951 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TPM2P07951 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM2P07951 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM2P07951 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM2P07951 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM2P07951 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM2P07951 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
TPM2P07951 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 AC233702.3-201ENST00000578656 1387 ntBASIC18.8■□□□□ 0.6
TPM2P07951 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM2P07951 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM2P07951 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM2P07951 AC005332.1-201ENST00000577698 1310 ntBASIC18.79■□□□□ 0.6
TPM2P07951 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC18.79■□□□□ 0.6
TPM2P07951 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms