Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 UNC93B7-201ENST00000509439 705 ntBASIC14.88□□□□□ -0.03
HLA-DPB1P04440 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 AC004817.3-201ENST00000602957 2129 ntBASIC14.88□□□□□ -0.03
HLA-DPB1P04440 AC013467.2-201ENST00000605472 835 ntBASIC14.88□□□□□ -0.03
HLA-DPB1P04440 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 AP005117.1-201ENST00000584346 1413 ntBASIC14.88□□□□□ -0.03
HLA-DPB1P04440 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 AC148477.5-201ENST00000625164 1645 ntBASIC14.88□□□□□ -0.03
HLA-DPB1P04440 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 AP005117.1-202ENST00000581724 1908 ntBASIC14.88□□□□□ -0.03
HLA-DPB1P04440 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DPB1P04440 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 GGT3P-204ENST00000453783 1664 ntBASIC14.87□□□□□ -0.03
HLA-DPB1P04440 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.87□□□□□ -0.03
HLA-DPB1P04440 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPB1P04440 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms