Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOC1P02654 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.65□□□□□ -0.06
APOC1P02654 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
APOC1P02654 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
APOC1P02654 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOC1P02654 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC1P02654 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
APOC1P02654 AC006504.4-201ENST00000592118 1568 ntBASIC14.64□□□□□ -0.07
APOC1P02654 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.64□□□□□ -0.07
APOC1P02654 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
APOC1P02654 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
APOC1P02654 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOC1P02654 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC1P02654 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOC1P02654 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
APOC1P02654 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
APOC1P02654 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOC1P02654 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
APOC1P02654 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC1P02654 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.64□□□□□ -0.07
APOC1P02654 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.64□□□□□ -0.07
APOC1P02654 ELK2BP-201ENST00000415014 1224 ntBASIC14.64□□□□□ -0.07
APOC1P02654 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.64□□□□□ -0.07
APOC1P02654 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.64□□□□□ -0.07
APOC1P02654 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.64□□□□□ -0.07
APOC1P02654 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.64□□□□□ -0.07
APOC1P02654 MIR4492-201ENST00000581627 80 ntBASIC14.64□□□□□ -0.07
APOC1P02654 CLEC4GP1-201ENST00000596555 870 ntBASIC14.64□□□□□ -0.07
APOC1P02654 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC1P02654 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
APOC1P02654 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOC1P02654 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC1P02654 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.64□□□□□ -0.07
APOC1P02654 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.64□□□□□ -0.07
APOC1P02654 KRT8P39-201ENST00000396270 1433 ntBASIC14.64□□□□□ -0.07
APOC1P02654 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC1P02654 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.64□□□□□ -0.07
APOC1P02654 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC1P02654 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC1P02654 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC1P02654 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.64□□□□□ -0.07
APOC1P02654 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
APOC1P02654 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
APOC1P02654 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
APOC1P02654 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.63□□□□□ -0.07
APOC1P02654 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.63□□□□□ -0.07
APOC1P02654 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.63□□□□□ -0.07
APOC1P02654 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
APOC1P02654 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.63□□□□□ -0.07
APOC1P02654 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.63□□□□□ -0.07
APOC1P02654 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
APOC1P02654 KRT18P27-201ENST00000427733 1299 ntBASIC14.63□□□□□ -0.07
APOC1P02654 AF186996.4-201ENST00000467186 377 ntBASIC14.63□□□□□ -0.07
APOC1P02654 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.63□□□□□ -0.07
APOC1P02654 AC087641.1-201ENST00000557561 1021 ntBASIC14.63□□□□□ -0.07
APOC1P02654 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.63□□□□□ -0.07
APOC1P02654 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.63□□□□□ -0.07
APOC1P02654 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.63□□□□□ -0.07
APOC1P02654 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.63□□□□□ -0.07
APOC1P02654 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.63□□□□□ -0.07
APOC1P02654 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.63□□□□□ -0.07
APOC1P02654 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.63□□□□□ -0.07
APOC1P02654 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
APOC1P02654 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.63□□□□□ -0.07
APOC1P02654 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC1P02654 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
APOC1P02654 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.62□□□□□ -0.07
APOC1P02654 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
APOC1P02654 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
APOC1P02654 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
APOC1P02654 ME2P1-201ENST00000426028 1970 ntBASIC14.62□□□□□ -0.07
APOC1P02654 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.62□□□□□ -0.07
APOC1P02654 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms