Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.09■□□□□ 0.49
CD4P01730 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.09■□□□□ 0.49
CD4P01730 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.09■□□□□ 0.49
CD4P01730 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.09■□□□□ 0.49
CD4P01730 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.09■□□□□ 0.49
CD4P01730 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CD4P01730 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CD4P01730 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.09■□□□□ 0.49
CD4P01730 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.09■□□□□ 0.49
CD4P01730 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CD4P01730 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.09■□□□□ 0.49
CD4P01730 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CD4P01730 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.09■□□□□ 0.49
CD4P01730 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD4P01730 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CD4P01730 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD4P01730 KRT8P39-201ENST00000396270 1433 ntBASIC18.08■□□□□ 0.49
CD4P01730 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CD4P01730 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CD4P01730 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CD4P01730 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD4P01730 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD4P01730 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD4P01730 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CD4P01730 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD4P01730 SPDYE17-201ENST00000412399 783 ntBASIC18.08■□□□□ 0.48
CD4P01730 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.08■□□□□ 0.48
CD4P01730 SERBP1P3-201ENST00000459980 809 ntBASIC18.08■□□□□ 0.48
CD4P01730 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.08■□□□□ 0.48
CD4P01730 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.08■□□□□ 0.48
CD4P01730 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.08■□□□□ 0.48
CD4P01730 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.08■□□□□ 0.48
CD4P01730 AC099568.2-201ENST00000609194 695 ntBASIC18.08■□□□□ 0.48
CD4P01730 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.08■□□□□ 0.48
CD4P01730 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.08■□□□□ 0.48
CD4P01730 AL033527.5-202ENST00000641632 1098 ntBASIC18.08■□□□□ 0.48
CD4P01730 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD4P01730 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
CD4P01730 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
CD4P01730 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD4P01730 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD4P01730 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD4P01730 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CD4P01730 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CD4P01730 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.07■□□□□ 0.48
CD4P01730 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CD4P01730 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.07■□□□□ 0.48
CD4P01730 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CD4P01730 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.07■□□□□ 0.48
CD4P01730 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.07■□□□□ 0.48
CD4P01730 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CD4P01730 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CD4P01730 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.07■□□□□ 0.48
CD4P01730 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 AC004461.2-201ENST00000629517 803 ntBASIC18.07■□□□□ 0.48
CD4P01730 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.07■□□□□ 0.48
CD4P01730 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CD4P01730 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.07■□□□□ 0.48
CD4P01730 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.07■□□□□ 0.48
CD4P01730 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CD4P01730 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD4P01730 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.06■□□□□ 0.48
CD4P01730 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CD4P01730 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.06■□□□□ 0.48
CD4P01730 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD4P01730 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD4P01730 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD4P01730 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD4P01730 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.06■□□□□ 0.48
CD4P01730 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CD4P01730 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.06■□□□□ 0.48
CD4P01730 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CD4P01730 ELK1P1-201ENST00000485699 580 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms