Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.54□□□□□ -0.24
CLN5O75503 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.54□□□□□ -0.24
CLN5O75503 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.54□□□□□ -0.24
CLN5O75503 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CLN5O75503 BX276092.5-203ENST00000456199 560 ntBASIC13.54□□□□□ -0.24
CLN5O75503 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.54□□□□□ -0.24
CLN5O75503 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.54□□□□□ -0.24
CLN5O75503 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 AL121672.3-201ENST00000608644 468 ntBASIC13.54□□□□□ -0.24
CLN5O75503 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CLN5O75503 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.54□□□□□ -0.24
CLN5O75503 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.54□□□□□ -0.24
CLN5O75503 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.54□□□□□ -0.24
CLN5O75503 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.54□□□□□ -0.24
CLN5O75503 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.54□□□□□ -0.24
CLN5O75503 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.54□□□□□ -0.24
CLN5O75503 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.54□□□□□ -0.24
CLN5O75503 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.54□□□□□ -0.24
CLN5O75503 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.54□□□□□ -0.24
CLN5O75503 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.54□□□□□ -0.24
CLN5O75503 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.54□□□□□ -0.24
CLN5O75503 AL353593.2-201ENST00000602529 1483 ntBASIC13.54□□□□□ -0.24
CLN5O75503 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CLN5O75503 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.54□□□□□ -0.24
CLN5O75503 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.54□□□□□ -0.24
CLN5O75503 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLN5O75503 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.54□□□□□ -0.24
CLN5O75503 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 RNF216P1-203ENST00000404404 2427 ntBASIC13.53□□□□□ -0.24
CLN5O75503 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CLN5O75503 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CLN5O75503 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.53□□□□□ -0.24
CLN5O75503 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CLN5O75503 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.53□□□□□ -0.24
CLN5O75503 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.53□□□□□ -0.24
CLN5O75503 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 CHCHD2P8-201ENST00000429873 447 ntBASIC13.53□□□□□ -0.24
CLN5O75503 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.53□□□□□ -0.24
CLN5O75503 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CLN5O75503 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.53□□□□□ -0.24
CLN5O75503 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.53□□□□□ -0.24
CLN5O75503 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.53□□□□□ -0.24
CLN5O75503 AC124947.2-201ENST00000547118 1133 ntBASIC13.53□□□□□ -0.24
CLN5O75503 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.53□□□□□ -0.24
CLN5O75503 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
CLN5O75503 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.53□□□□□ -0.24
CLN5O75503 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.53□□□□□ -0.24
CLN5O75503 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CLN5O75503 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.53□□□□□ -0.24
CLN5O75503 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CLN5O75503 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.53□□□□□ -0.24
CLN5O75503 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CLN5O75503 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.53□□□□□ -0.24
CLN5O75503 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CLN5O75503 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLN5O75503 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CLN5O75503 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CLN5O75503 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLN5O75503 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms