Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
OPHN1O60890 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
OPHN1O60890 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OPHN1O60890 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
OPHN1O60890 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
OPHN1O60890 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OPHN1O60890 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.25■□□□□ 0.35
OPHN1O60890 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
OPHN1O60890 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.25■□□□□ 0.35
OPHN1O60890 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
OPHN1O60890 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 PI4KAP1-204ENST00000612579 1703 ntBASIC17.25■□□□□ 0.35
OPHN1O60890 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
OPHN1O60890 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.25■□□□□ 0.35
OPHN1O60890 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.25■□□□□ 0.35
OPHN1O60890 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.25■□□□□ 0.35
OPHN1O60890 RPS15P9-201ENST00000494093 319 ntBASIC17.25■□□□□ 0.35
OPHN1O60890 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.25■□□□□ 0.35
OPHN1O60890 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.25■□□□□ 0.35
OPHN1O60890 AC004790.2-201ENST00000623588 572 ntBASIC17.25■□□□□ 0.35
OPHN1O60890 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.25■□□□□ 0.35
OPHN1O60890 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
OPHN1O60890 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
OPHN1O60890 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.25■□□□□ 0.35
OPHN1O60890 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
OPHN1O60890 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.25■□□□□ 0.35
OPHN1O60890 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
OPHN1O60890 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPHN1O60890 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
OPHN1O60890 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
OPHN1O60890 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OPHN1O60890 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.24■□□□□ 0.35
OPHN1O60890 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
OPHN1O60890 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OPHN1O60890 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.24■□□□□ 0.35
OPHN1O60890 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.24■□□□□ 0.35
OPHN1O60890 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OPHN1O60890 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
OPHN1O60890 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OPHN1O60890 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.24■□□□□ 0.35
OPHN1O60890 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OPHN1O60890 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.24■□□□□ 0.35
OPHN1O60890 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
OPHN1O60890 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.24■□□□□ 0.35
OPHN1O60890 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.24■□□□□ 0.35
OPHN1O60890 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.24■□□□□ 0.35
OPHN1O60890 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.24■□□□□ 0.35
OPHN1O60890 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
OPHN1O60890 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.24■□□□□ 0.35
OPHN1O60890 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OPHN1O60890 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OPHN1O60890 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OPHN1O60890 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OPHN1O60890 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.24■□□□□ 0.35
OPHN1O60890 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
OPHN1O60890 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
OPHN1O60890 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.23■□□□□ 0.35
OPHN1O60890 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
OPHN1O60890 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
OPHN1O60890 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
OPHN1O60890 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
OPHN1O60890 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
OPHN1O60890 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
OPHN1O60890 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
OPHN1O60890 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.23■□□□□ 0.35
OPHN1O60890 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 AL035633.1-201ENST00000406139 838 ntBASIC17.23■□□□□ 0.35
OPHN1O60890 TSEN15P1-201ENST00000423257 515 ntBASIC17.23■□□□□ 0.35
OPHN1O60890 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.23■□□□□ 0.35
OPHN1O60890 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.23■□□□□ 0.35
OPHN1O60890 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
OPHN1O60890 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 MST1L-201ENST00000442552 2185 ntBASIC17.23■□□□□ 0.35
OPHN1O60890 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms