Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MSI1O43347 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MSI1O43347 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MSI1O43347 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.08■□□□□ 0.32
MSI1O43347 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.08■□□□□ 0.32
MSI1O43347 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.08■□□□□ 0.32
MSI1O43347 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
MSI1O43347 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.08■□□□□ 0.32
MSI1O43347 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MSI1O43347 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.08■□□□□ 0.32
MSI1O43347 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.08■□□□□ 0.32
MSI1O43347 AC027796.2-201ENST00000575326 344 ntBASIC17.08■□□□□ 0.32
MSI1O43347 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.08■□□□□ 0.32
MSI1O43347 Z92544.3-201ENST00000624747 417 ntBASIC17.08■□□□□ 0.32
MSI1O43347 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.08■□□□□ 0.32
MSI1O43347 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.08■□□□□ 0.32
MSI1O43347 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.08■□□□□ 0.32
MSI1O43347 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
MSI1O43347 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
MSI1O43347 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MSI1O43347 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MSI1O43347 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MSI1O43347 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.08■□□□□ 0.32
MSI1O43347 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MSI1O43347 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MSI1O43347 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MSI1O43347 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.08■□□□□ 0.32
MSI1O43347 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.08■□□□□ 0.32
MSI1O43347 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MSI1O43347 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 AL662844.4-201ENST00000606367 2838 ntBASIC17.07■□□□□ 0.32
MSI1O43347 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
MSI1O43347 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MSI1O43347 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.07■□□□□ 0.32
MSI1O43347 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.07■□□□□ 0.32
MSI1O43347 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.07■□□□□ 0.32
MSI1O43347 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.07■□□□□ 0.32
MSI1O43347 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.07■□□□□ 0.32
MSI1O43347 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.07■□□□□ 0.32
MSI1O43347 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
MSI1O43347 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MSI1O43347 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
MSI1O43347 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
MSI1O43347 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MSI1O43347 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.07■□□□□ 0.32
MSI1O43347 AC046158.3-201ENST00000624947 2558 ntBASIC17.07■□□□□ 0.32
MSI1O43347 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.07■□□□□ 0.32
MSI1O43347 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.07■□□□□ 0.32
MSI1O43347 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 LINC01144-201ENST00000626198 1710 ntBASIC17.07■□□□□ 0.32
MSI1O43347 AC005622.1-201ENST00000636801 1703 ntBASIC17.07■□□□□ 0.32
MSI1O43347 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
MSI1O43347 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MSI1O43347 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.07■□□□□ 0.32
MSI1O43347 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MSI1O43347 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.07■□□□□ 0.32
MSI1O43347 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.06■□□□□ 0.32
MSI1O43347 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MSI1O43347 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.06■□□□□ 0.32
MSI1O43347 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
MSI1O43347 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.06■□□□□ 0.32
MSI1O43347 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
MSI1O43347 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
MSI1O43347 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.06■□□□□ 0.32
MSI1O43347 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.06■□□□□ 0.32
MSI1O43347 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.06■□□□□ 0.32
MSI1O43347 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.06■□□□□ 0.32
MSI1O43347 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
MSI1O43347 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.06■□□□□ 0.32
MSI1O43347 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.06■□□□□ 0.32
MSI1O43347 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms