Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
APAF1O14727 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
APAF1O14727 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC21.64■■□□□ 1.05
APAF1O14727 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC21.64■■□□□ 1.05
APAF1O14727 GOLGA2P9-201ENST00000596977 1937 ntBASIC21.64■■□□□ 1.05
APAF1O14727 MTHFR-217ENST00000641820 1569 ntBASIC21.64■■□□□ 1.05
APAF1O14727 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
APAF1O14727 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC21.64■■□□□ 1.05
APAF1O14727 AL589702.1-201ENST00000641229 1509 ntBASIC21.64■■□□□ 1.05
APAF1O14727 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.64■■□□□ 1.05
APAF1O14727 PGR-209ENST00000617858 2816 ntTSL 5 BASIC21.64■■□□□ 1.05
APAF1O14727 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
APAF1O14727 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
APAF1O14727 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
APAF1O14727 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC21.63■■□□□ 1.05
APAF1O14727 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
APAF1O14727 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
APAF1O14727 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
APAF1O14727 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
APAF1O14727 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
APAF1O14727 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
APAF1O14727 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
APAF1O14727 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
APAF1O14727 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
APAF1O14727 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
APAF1O14727 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
APAF1O14727 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
APAF1O14727 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC21.63■■□□□ 1.05
APAF1O14727 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
APAF1O14727 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC21.63■■□□□ 1.05
APAF1O14727 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC21.63■■□□□ 1.05
APAF1O14727 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.63■■□□□ 1.05
APAF1O14727 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.63■■□□□ 1.05
APAF1O14727 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.63■■□□□ 1.05
APAF1O14727 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
APAF1O14727 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
APAF1O14727 AP000842.3-202ENST00000569238 1080 ntBASIC21.63■■□□□ 1.05
APAF1O14727 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.63■■□□□ 1.05
APAF1O14727 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
APAF1O14727 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
APAF1O14727 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC21.63■■□□□ 1.05
APAF1O14727 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
APAF1O14727 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
APAF1O14727 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC21.63■■□□□ 1.05
APAF1O14727 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
APAF1O14727 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APAF1O14727 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APAF1O14727 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
APAF1O14727 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC21.62■■□□□ 1.05
APAF1O14727 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC21.62■■□□□ 1.05
APAF1O14727 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APAF1O14727 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APAF1O14727 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC21.62■■□□□ 1.05
APAF1O14727 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC21.62■■□□□ 1.05
APAF1O14727 AC018695.7-201ENST00000624587 2492 ntBASIC21.62■■□□□ 1.05
APAF1O14727 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
APAF1O14727 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.62■■□□□ 1.05
APAF1O14727 FAM58DP-201ENST00000428076 619 ntBASIC21.62■■□□□ 1.05
APAF1O14727 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
APAF1O14727 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.62■■□□□ 1.05
APAF1O14727 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
APAF1O14727 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.62■■□□□ 1.05
APAF1O14727 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.62■■□□□ 1.05
APAF1O14727 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC21.62■■□□□ 1.05
APAF1O14727 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC21.62■■□□□ 1.05
APAF1O14727 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
APAF1O14727 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APAF1O14727 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APAF1O14727 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
APAF1O14727 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
APAF1O14727 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
APAF1O14727 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
APAF1O14727 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
APAF1O14727 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
APAF1O14727 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APAF1O14727 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
APAF1O14727 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APAF1O14727 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APAF1O14727 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APAF1O14727 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
APAF1O14727 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC21.61■■□□□ 1.05
APAF1O14727 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC21.61■■□□□ 1.05
APAF1O14727 U82695.1-201ENST00000635752 1889 ntBASIC21.61■■□□□ 1.05
APAF1O14727 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
APAF1O14727 MIR1233-2-201ENST00000408138 82 ntBASIC21.61■■□□□ 1.05
APAF1O14727 MIR1233-1-201ENST00000408722 82 ntBASIC21.61■■□□□ 1.05
APAF1O14727 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
APAF1O14727 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
APAF1O14727 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
APAF1O14727 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
APAF1O14727 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.61■■□□□ 1.05
APAF1O14727 AC105233.2-201ENST00000523697 349 ntBASIC21.61■■□□□ 1.05
APAF1O14727 AF228730.5-201ENST00000530288 346 ntBASIC21.61■■□□□ 1.05
APAF1O14727 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.61■■□□□ 1.05
APAF1O14727 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.61■■□□□ 1.05
APAF1O14727 AC084121.4-201ENST00000641598 221 ntBASIC21.61■■□□□ 1.05
APAF1O14727 AF228730.8-201ENST00000642140 221 ntBASIC21.61■■□□□ 1.05
APAF1O14727 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APAF1O14727 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APAF1O14727 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms