Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
UPK1AO00322 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
UPK1AO00322 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.64■□□□□ 0.09
UPK1AO00322 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
UPK1AO00322 FDX1P1-201ENST00000449115 551 ntBASIC15.64■□□□□ 0.09
UPK1AO00322 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.64■□□□□ 0.09
UPK1AO00322 CXCL1P1-201ENST00000502804 216 ntBASIC15.64■□□□□ 0.09
UPK1AO00322 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.64■□□□□ 0.09
UPK1AO00322 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
UPK1AO00322 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.64■□□□□ 0.09
UPK1AO00322 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.64■□□□□ 0.09
UPK1AO00322 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.64■□□□□ 0.09
UPK1AO00322 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.64■□□□□ 0.09
UPK1AO00322 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.64■□□□□ 0.09
UPK1AO00322 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.64■□□□□ 0.09
UPK1AO00322 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
UPK1AO00322 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.64■□□□□ 0.09
UPK1AO00322 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.64■□□□□ 0.09
UPK1AO00322 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
UPK1AO00322 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1AO00322 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
UPK1AO00322 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.63■□□□□ 0.09
UPK1AO00322 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
UPK1AO00322 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.63■□□□□ 0.09
UPK1AO00322 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
UPK1AO00322 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
UPK1AO00322 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.63■□□□□ 0.09
UPK1AO00322 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 CRYGEP-201ENST00000412192 528 ntBASIC15.63■□□□□ 0.09
UPK1AO00322 IGLL3P-201ENST00000412472 434 ntBASIC15.63■□□□□ 0.09
UPK1AO00322 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.63■□□□□ 0.09
UPK1AO00322 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
UPK1AO00322 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.63■□□□□ 0.09
UPK1AO00322 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.63■□□□□ 0.09
UPK1AO00322 Z83851.2-201ENST00000609564 659 ntBASIC15.63■□□□□ 0.09
UPK1AO00322 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.63■□□□□ 0.09
UPK1AO00322 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.63■□□□□ 0.09
UPK1AO00322 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.63■□□□□ 0.09
UPK1AO00322 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.63■□□□□ 0.09
UPK1AO00322 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.63■□□□□ 0.09
UPK1AO00322 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
UPK1AO00322 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
UPK1AO00322 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UPK1AO00322 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.63■□□□□ 0.09
UPK1AO00322 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
UPK1AO00322 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.63■□□□□ 0.09
UPK1AO00322 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
UPK1AO00322 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UPK1AO00322 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.63■□□□□ 0.09
UPK1AO00322 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1AO00322 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
UPK1AO00322 AL031731.1-201ENST00000642131 2094 ntBASIC15.63■□□□□ 0.09
UPK1AO00322 AC006449.6-201ENST00000612330 2296 ntBASIC15.63■□□□□ 0.09
UPK1AO00322 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.62■□□□□ 0.09
UPK1AO00322 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
UPK1AO00322 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.62■□□□□ 0.09
UPK1AO00322 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.62■□□□□ 0.09
UPK1AO00322 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms