Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 DNM1P51-201ENST00000558149 522 ntBASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 CD8B2-202ENST00000417670 633 ntBASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 DNAJB1P1-201ENST00000429417 1024 ntBASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 ALG1L13P-202ENST00000519320 584 ntBASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 AL353770.1-201ENST00000614915 403 ntBASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 AC103691.2-201ENST00000618824 433 ntBASIC25.48■■□□□ 1.67
RIMBP3Q9UFD9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RIMBP3Q9UFD9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC25.47■■□□□ 1.67
RIMBP3Q9UFD9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RIMBP3Q9UFD9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
RIMBP3Q9UFD9 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RIMBP3Q9UFD9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC25.47■■□□□ 1.67
RIMBP3Q9UFD9 KRT8P39-201ENST00000396270 1433 ntBASIC25.47■■□□□ 1.67
RIMBP3Q9UFD9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
RIMBP3Q9UFD9 IGLV3-15-201ENST00000518356 244 ntBASIC25.47■■□□□ 1.67
RIMBP3Q9UFD9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC25.47■■□□□ 1.67
RIMBP3Q9UFD9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RIMBP3Q9UFD9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RIMBP3Q9UFD9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC25.46■■□□□ 1.67
RIMBP3Q9UFD9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RIMBP3Q9UFD9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RIMBP3Q9UFD9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RIMBP3Q9UFD9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC25.46■■□□□ 1.67
RIMBP3Q9UFD9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RIMBP3Q9UFD9 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC25.46■■□□□ 1.67
RIMBP3Q9UFD9 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RIMBP3Q9UFD9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC25.46■■□□□ 1.67
RIMBP3Q9UFD9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC25.46■■□□□ 1.67
RIMBP3Q9UFD9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RIMBP3Q9UFD9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RIMBP3Q9UFD9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RIMBP3Q9UFD9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RIMBP3Q9UFD9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
RIMBP3Q9UFD9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
RIMBP3Q9UFD9 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
RIMBP3Q9UFD9 NDUFAB1P1-201ENST00000404262 460 ntBASIC25.45■■□□□ 1.67
RIMBP3Q9UFD9 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
RIMBP3Q9UFD9 AC106794.1-201ENST00000506935 792 ntBASIC25.45■■□□□ 1.67
RIMBP3Q9UFD9 AC026410.3-201ENST00000514280 936 ntBASIC25.45■■□□□ 1.67
RIMBP3Q9UFD9 RBM8B-201ENST00000555532 525 ntBASIC25.45■■□□□ 1.67
RIMBP3Q9UFD9 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC25.45■■□□□ 1.67
RIMBP3Q9UFD9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC25.45■■□□□ 1.67
RIMBP3Q9UFD9 AC000095.1-201ENST00000603208 874 ntBASIC25.45■■□□□ 1.67
RIMBP3Q9UFD9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
RIMBP3Q9UFD9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
RIMBP3Q9UFD9 KRT8P35-201ENST00000483942 1338 ntBASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 RPL18P13-201ENST00000478088 569 ntBASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 AC132938.4-201ENST00000623835 848 ntBASIC25.45■■□□□ 1.66
RIMBP3Q9UFD9 AFG3L1P-217ENST00000557444 2447 ntBASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms