Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 FAM86C2P-203ENST00000528684 1004 ntBASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 AC092865.5-201ENST00000545435 363 ntBASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 AP002472.1-201ENST00000577490 586 ntBASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 MIR600HG-201ENST00000449175 5984 ntBASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 AC092474.2-201ENST00000424288 719 ntBASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 AC079328.2-201ENST00000561241 3354 ntBASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PARPBPQ9NWS1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PARPBPQ9NWS1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms