Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 AC093520.2-201ENST00000561830 333 ntBASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 AC093028.1-201ENST00000622998 982 ntBASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CDCP1Q9H5V8 AC105020.1-201ENST00000435356 2205 ntBASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 HLA-J-203ENST00000494367 1087 ntBASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 AC021097.1-201ENST00000607902 574 ntBASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 LINC00628-201ENST00000628516 1289 ntBASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 UXT-AS1-201ENST00000590504 1525 ntBASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 FER1L4-210ENST00000615531 5998 ntBASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 AC016027.1-202ENST00000607927 1699 ntBASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 PCDHA14-201ENST00000506751 2298 ntBASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CDCP1Q9H5V8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 AC060834.1-201ENST00000443027 2032 ntBASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 KRT18P32-201ENST00000424695 1287 ntBASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.4■□□□□ 0.06
CDCP1Q9H5V8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms