Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIPK3Q9H422 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIPK3Q9H422 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIPK3Q9H422 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.89■□□□□ 0.45
HIPK3Q9H422 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIPK3Q9H422 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.89■□□□□ 0.45
HIPK3Q9H422 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HIPK3Q9H422 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
HIPK3Q9H422 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIPK3Q9H422 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HIPK3Q9H422 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HIPK3Q9H422 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.89■□□□□ 0.45
HIPK3Q9H422 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIPK3Q9H422 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
HIPK3Q9H422 SNX29P1-201ENST00000548357 1007 ntBASIC17.89■□□□□ 0.45
HIPK3Q9H422 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
HIPK3Q9H422 MIR4525-201ENST00000580000 75 ntBASIC17.89■□□□□ 0.45
HIPK3Q9H422 AC008735.3-201ENST00000596646 500 ntBASIC17.89■□□□□ 0.45
HIPK3Q9H422 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.89■□□□□ 0.45
HIPK3Q9H422 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIPK3Q9H422 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
HIPK3Q9H422 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIPK3Q9H422 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
HIPK3Q9H422 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIPK3Q9H422 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HIPK3Q9H422 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.89■□□□□ 0.45
HIPK3Q9H422 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIPK3Q9H422 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 AC092053.1-201ENST00000605787 1936 ntBASIC17.88■□□□□ 0.45
HIPK3Q9H422 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 RRP7BP-205ENST00000566851 833 ntBASIC17.88■□□□□ 0.45
HIPK3Q9H422 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 AL033527.5-201ENST00000641382 801 ntBASIC17.88■□□□□ 0.45
HIPK3Q9H422 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.88■□□□□ 0.45
HIPK3Q9H422 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIPK3Q9H422 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HIPK3Q9H422 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.87■□□□□ 0.45
HIPK3Q9H422 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HIPK3Q9H422 FAM86MP-201ENST00000340703 885 ntBASIC17.87■□□□□ 0.45
HIPK3Q9H422 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HIPK3Q9H422 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.87■□□□□ 0.45
HIPK3Q9H422 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HIPK3Q9H422 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.87■□□□□ 0.45
HIPK3Q9H422 AC015936.2-201ENST00000593177 259 ntBASIC17.87■□□□□ 0.45
HIPK3Q9H422 TMEM261P1-201ENST00000604899 340 ntBASIC17.87■□□□□ 0.45
HIPK3Q9H422 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.87■□□□□ 0.45
HIPK3Q9H422 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 AC008764.6-201ENST00000595909 2069 ntBASIC17.87■□□□□ 0.45
HIPK3Q9H422 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIPK3Q9H422 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.87■□□□□ 0.45
HIPK3Q9H422 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.87■□□□□ 0.45
HIPK3Q9H422 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.87■□□□□ 0.45
HIPK3Q9H422 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms