Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 CROCCP4-201ENST00000457096 498 ntBASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 TIMM17BP1-201ENST00000545713 516 ntBASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 REXO1L6P-201ENST00000603433 1515 ntBASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 USP32P1-208ENST00000506594 1164 ntBASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 BTNL10-201ENST00000595971 695 ntBASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTFDC1Q9BY42 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 Z97205.2-201ENST00000564697 1639 ntBASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 PCDHB18P-201ENST00000524813 2368 ntBASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 CYP4F24P-201ENST00000586049 1580 ntBASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTFDC1Q9BY42 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RTFDC1Q9BY42 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RTFDC1Q9BY42 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RTFDC1Q9BY42 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RTFDC1Q9BY42 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RTFDC1Q9BY42 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RTFDC1Q9BY42 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 AL136982.4-201ENST00000437689 1740 ntBASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTFDC1Q9BY42 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms