Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 AC002310.6-201ENST00000624451 1377 ntBASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 AC010491.1-201ENST00000563101 2797 ntBASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 MIR600HG-201ENST00000449175 5984 ntBASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
THUMPD3Q9BV44 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
THUMPD3Q9BV44 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
THUMPD3Q9BV44 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
THUMPD3Q9BV44 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
THUMPD3Q9BV44 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
THUMPD3Q9BV44 AC006449.6-201ENST00000612330 2296 ntBASIC15.83■□□□□ 0.13
THUMPD3Q9BV44 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
THUMPD3Q9BV44 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
THUMPD3Q9BV44 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 LINC01711-201ENST00000598340 967 ntBASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
THUMPD3Q9BV44 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 AL512652.2-201ENST00000625156 1716 ntBASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 AL603832.2-201ENST00000566195 2125 ntBASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 AC106795.1-205ENST00000512851 1056 ntBASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
THUMPD3Q9BV44 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
THUMPD3Q9BV44 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms