Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PTPN18Q99952 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN18Q99952 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PTPN18Q99952 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN18Q99952 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN18Q99952 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN18Q99952 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PTPN18Q99952 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN18Q99952 GGT4P-201ENST00000623672 1708 ntBASIC18.63■□□□□ 0.57
PTPN18Q99952 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
PTPN18Q99952 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PTPN18Q99952 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PTPN18Q99952 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN18Q99952 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PTPN18Q99952 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTPN18Q99952 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PTPN18Q99952 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN18Q99952 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN18Q99952 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN18Q99952 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN18Q99952 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PTPN18Q99952 PFN1P12-201ENST00000455938 534 ntBASIC18.62■□□□□ 0.57
PTPN18Q99952 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.62■□□□□ 0.57
PTPN18Q99952 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN18Q99952 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
PTPN18Q99952 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.62■□□□□ 0.57
PTPN18Q99952 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPN18Q99952 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN18Q99952 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN18Q99952 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN18Q99952 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN18Q99952 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN18Q99952 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN18Q99952 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN18Q99952 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PTPN18Q99952 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN18Q99952 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN18Q99952 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN18Q99952 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTPN18Q99952 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.61■□□□□ 0.57
PTPN18Q99952 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN18Q99952 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
PTPN18Q99952 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PTPN18Q99952 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PTPN18Q99952 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN18Q99952 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTPN18Q99952 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PTPN18Q99952 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN18Q99952 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN18Q99952 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PTPN18Q99952 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN18Q99952 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPN18Q99952 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPN18Q99952 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN18Q99952 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPN18Q99952 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN18Q99952 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN18Q99952 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN18Q99952 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN18Q99952 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTPN18Q99952 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTPN18Q99952 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPN18Q99952 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PTPN18Q99952 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPN18Q99952 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPN18Q99952 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPN18Q99952 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN18Q99952 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPN18Q99952 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN18Q99952 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN18Q99952 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN18Q99952 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN18Q99952 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN18Q99952 AC068587.3-201ENST00000526613 355 ntBASIC18.6■□□□□ 0.57
PTPN18Q99952 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN18Q99952 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN18Q99952 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.6■□□□□ 0.57
PTPN18Q99952 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPN18Q99952 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 U82695.1-201ENST00000635752 1889 ntBASIC18.6■□□□□ 0.57
PTPN18Q99952 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN18Q99952 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms