Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.65■□□□□ 0.58
SMARCE1Q969G3 PCGF3-213ENST00000620529 1899 ntBASIC18.65■□□□□ 0.58
SMARCE1Q969G3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 AC006449.6-201ENST00000612330 2296 ntBASIC18.65■□□□□ 0.58
SMARCE1Q969G3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 AC087641.1-201ENST00000557561 1021 ntBASIC18.65■□□□□ 0.58
SMARCE1Q969G3 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 GGTLC5P-201ENST00000617623 998 ntBASIC18.65■□□□□ 0.58
SMARCE1Q969G3 AP001350.2-201ENST00000625104 1094 ntBASIC18.65■□□□□ 0.58
SMARCE1Q969G3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCE1Q969G3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMARCE1Q969G3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
SMARCE1Q969G3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCE1Q969G3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 AC073621.1-201ENST00000392730 636 ntBASIC18.63■□□□□ 0.57
SMARCE1Q969G3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.63■□□□□ 0.57
SMARCE1Q969G3 KRT18P27-201ENST00000427733 1299 ntBASIC18.63■□□□□ 0.57
SMARCE1Q969G3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 AC005412.3-201ENST00000580309 715 ntBASIC18.63■□□□□ 0.57
SMARCE1Q969G3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 PAUPAR-201ENST00000630360 2965 ntBASIC18.63■□□□□ 0.57
SMARCE1Q969G3 AC129492.6-201ENST00000611383 1305 ntBASIC18.63■□□□□ 0.57
SMARCE1Q969G3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 LINC01144-201ENST00000626198 1710 ntBASIC18.63■□□□□ 0.57
SMARCE1Q969G3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCE1Q969G3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCE1Q969G3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCE1Q969G3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SMARCE1Q969G3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SMARCE1Q969G3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.62■□□□□ 0.57
SMARCE1Q969G3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCE1Q969G3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms