Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP13Q92995 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.27■□□□□ 0.36
USP13Q92995 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.27■□□□□ 0.36
USP13Q92995 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP13Q92995 AC138761.1-201ENST00000584393 385 ntBASIC17.27■□□□□ 0.36
USP13Q92995 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.27■□□□□ 0.36
USP13Q92995 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP13Q92995 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP13Q92995 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP13Q92995 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.27■□□□□ 0.35
USP13Q92995 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP13Q92995 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
USP13Q92995 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
USP13Q92995 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.26■□□□□ 0.35
USP13Q92995 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
USP13Q92995 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
USP13Q92995 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
USP13Q92995 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.26■□□□□ 0.35
USP13Q92995 COX20P2-201ENST00000452636 358 ntBASIC17.26■□□□□ 0.35
USP13Q92995 KRT18P34-201ENST00000488218 1270 ntBASIC17.26■□□□□ 0.35
USP13Q92995 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
USP13Q92995 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.26■□□□□ 0.35
USP13Q92995 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.26■□□□□ 0.35
USP13Q92995 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.26■□□□□ 0.35
USP13Q92995 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
USP13Q92995 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.26■□□□□ 0.35
USP13Q92995 MIR4453-201ENST00000584019 89 ntBASIC17.26■□□□□ 0.35
USP13Q92995 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.26■□□□□ 0.35
USP13Q92995 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.26■□□□□ 0.35
USP13Q92995 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.26■□□□□ 0.35
USP13Q92995 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
USP13Q92995 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.26■□□□□ 0.35
USP13Q92995 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP13Q92995 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
USP13Q92995 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP13Q92995 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
USP13Q92995 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.25■□□□□ 0.35
USP13Q92995 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP13Q92995 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP13Q92995 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.25■□□□□ 0.35
USP13Q92995 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
USP13Q92995 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.25■□□□□ 0.35
USP13Q92995 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP13Q92995 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP13Q92995 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP13Q92995 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP13Q92995 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
USP13Q92995 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.25■□□□□ 0.35
USP13Q92995 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.25■□□□□ 0.35
USP13Q92995 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP13Q92995 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.25■□□□□ 0.35
USP13Q92995 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.25■□□□□ 0.35
USP13Q92995 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP13Q92995 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.25■□□□□ 0.35
USP13Q92995 IGHV3-42-201ENST00000520410 361 ntBASIC17.25■□□□□ 0.35
USP13Q92995 AC105233.2-201ENST00000523697 349 ntBASIC17.25■□□□□ 0.35
USP13Q92995 AF228730.5-201ENST00000530288 346 ntBASIC17.25■□□□□ 0.35
USP13Q92995 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.25■□□□□ 0.35
USP13Q92995 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.25■□□□□ 0.35
USP13Q92995 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.25■□□□□ 0.35
USP13Q92995 AL158211.3-201ENST00000607385 239 ntBASIC17.25■□□□□ 0.35
USP13Q92995 AL390754.1-201ENST00000619088 582 ntBASIC17.25■□□□□ 0.35
USP13Q92995 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
USP13Q92995 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
USP13Q92995 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.25■□□□□ 0.35
USP13Q92995 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP13Q92995 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.25■□□□□ 0.35
USP13Q92995 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP13Q92995 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP13Q92995 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP13Q92995 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.24■□□□□ 0.35
USP13Q92995 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.24■□□□□ 0.35
USP13Q92995 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.24■□□□□ 0.35
USP13Q92995 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.24■□□□□ 0.35
USP13Q92995 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
USP13Q92995 AL671710.1-201ENST00000610245 2349 ntBASIC17.24■□□□□ 0.35
USP13Q92995 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.24■□□□□ 0.35
USP13Q92995 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.24■□□□□ 0.35
USP13Q92995 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms