Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ELL2P1-201ENST00000413990 1906 ntBASIC17.53■□□□□ 0.4
DDX1Q92499 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX1Q92499 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.52■□□□□ 0.4
DDX1Q92499 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.52■□□□□ 0.4
DDX1Q92499 AC024909.3-201ENST00000611513 2257 ntBASIC17.52■□□□□ 0.4
DDX1Q92499 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
DDX1Q92499 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.52■□□□□ 0.4
DDX1Q92499 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
DDX1Q92499 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.52■□□□□ 0.4
DDX1Q92499 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.52■□□□□ 0.4
DDX1Q92499 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
DDX1Q92499 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DDX1Q92499 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DDX1Q92499 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
DDX1Q92499 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX1Q92499 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DDX1Q92499 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DDX1Q92499 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DDX1Q92499 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.52■□□□□ 0.4
DDX1Q92499 ALG1L5P-201ENST00000482043 771 ntBASIC17.52■□□□□ 0.4
DDX1Q92499 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
DDX1Q92499 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DDX1Q92499 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.52■□□□□ 0.4
DDX1Q92499 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.52■□□□□ 0.4
DDX1Q92499 AL078644.1-201ENST00000609881 752 ntBASIC17.52■□□□□ 0.4
DDX1Q92499 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.52■□□□□ 0.4
DDX1Q92499 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX1Q92499 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX1Q92499 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
DDX1Q92499 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX1Q92499 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.52■□□□□ 0.4
DDX1Q92499 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
DDX1Q92499 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
DDX1Q92499 OR6D1P-202ENST00000641007 5290 ntBASIC17.52■□□□□ 0.39
DDX1Q92499 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
DDX1Q92499 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
DDX1Q92499 AC016027.1-202ENST00000607927 1699 ntBASIC17.52■□□□□ 0.39
DDX1Q92499 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DDX1Q92499 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.51■□□□□ 0.39
DDX1Q92499 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.51■□□□□ 0.39
DDX1Q92499 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DDX1Q92499 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.51■□□□□ 0.39
DDX1Q92499 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.51■□□□□ 0.39
DDX1Q92499 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.51■□□□□ 0.39
DDX1Q92499 AC093724.1-201ENST00000448659 1027 ntBASIC17.51■□□□□ 0.39
DDX1Q92499 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.51■□□□□ 0.39
DDX1Q92499 AC074386.1-202ENST00000463561 864 ntBASIC17.51■□□□□ 0.39
DDX1Q92499 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
DDX1Q92499 AC138761.1-201ENST00000584393 385 ntBASIC17.51■□□□□ 0.39
DDX1Q92499 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.51■□□□□ 0.39
DDX1Q92499 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.51■□□□□ 0.39
DDX1Q92499 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.51■□□□□ 0.39
DDX1Q92499 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DDX1Q92499 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.51■□□□□ 0.39
DDX1Q92499 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
DDX1Q92499 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DDX1Q92499 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
DDX1Q92499 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX1Q92499 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX1Q92499 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
DDX1Q92499 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX1Q92499 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX1Q92499 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX1Q92499 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX1Q92499 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX1Q92499 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.5■□□□□ 0.39
DDX1Q92499 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.5■□□□□ 0.39
DDX1Q92499 CEND1P1-201ENST00000451006 455 ntBASIC17.5■□□□□ 0.39
DDX1Q92499 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX1Q92499 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.5■□□□□ 0.39
DDX1Q92499 AC068137.2-201ENST00000605408 478 ntBASIC17.5■□□□□ 0.39
DDX1Q92499 AC022188.1-201ENST00000620960 1664 ntBASIC17.5■□□□□ 0.39
DDX1Q92499 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DDX1Q92499 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX1Q92499 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
DDX1Q92499 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.5■□□□□ 0.39
DDX1Q92499 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX1Q92499 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX1Q92499 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX1Q92499 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX1Q92499 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX1Q92499 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX1Q92499 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX1Q92499 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX1Q92499 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.5■□□□□ 0.39
DDX1Q92499 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms