Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 HOMER2P1-201ENST00000455653 964 ntBASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 KRT18P21-201ENST00000515767 1272 ntBASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 TP73-AS1-210ENST00000637775 1455 ntBASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 AC117947.1-201ENST00000427448 529 ntBASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 FAM210CP-201ENST00000445714 574 ntBASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 AC005363.2-201ENST00000618631 242 ntBASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 AP000867.4-201ENST00000641616 219 ntBASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 AC023908.3-201ENST00000564211 3047 ntBASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 INTS4P1-201ENST00000438455 1935 ntBASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKAP2Q8WWK9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms