Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RDH11Q8TC12 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RDH11Q8TC12 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.26■□□□□ 0.19
RDH11Q8TC12 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.26■□□□□ 0.19
RDH11Q8TC12 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.26■□□□□ 0.19
RDH11Q8TC12 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RDH11Q8TC12 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.26■□□□□ 0.19
RDH11Q8TC12 AL121772.3-201ENST00000610840 674 ntBASIC16.26■□□□□ 0.19
RDH11Q8TC12 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RDH11Q8TC12 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RDH11Q8TC12 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.26■□□□□ 0.19
RDH11Q8TC12 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RDH11Q8TC12 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RDH11Q8TC12 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RDH11Q8TC12 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RDH11Q8TC12 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RDH11Q8TC12 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RDH11Q8TC12 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RDH11Q8TC12 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.26■□□□□ 0.19
RDH11Q8TC12 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 RPS15P9-201ENST00000494093 319 ntBASIC16.25■□□□□ 0.19
RDH11Q8TC12 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 KRT126P-201ENST00000549467 1181 ntBASIC16.25■□□□□ 0.19
RDH11Q8TC12 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 AC025062.2-201ENST00000605477 670 ntBASIC16.25■□□□□ 0.19
RDH11Q8TC12 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RDH11Q8TC12 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.25■□□□□ 0.19
RDH11Q8TC12 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 AC107918.4-202ENST00000641623 219 ntBASIC16.24■□□□□ 0.19
RDH11Q8TC12 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.24■□□□□ 0.19
RDH11Q8TC12 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RDH11Q8TC12 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RDH11Q8TC12 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RDH11Q8TC12 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RDH11Q8TC12 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RDH11Q8TC12 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.23■□□□□ 0.19
RDH11Q8TC12 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RDH11Q8TC12 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RDH11Q8TC12 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.23■□□□□ 0.19
RDH11Q8TC12 AC005622.1-201ENST00000636801 1703 ntBASIC16.23■□□□□ 0.19
RDH11Q8TC12 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RDH11Q8TC12 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RDH11Q8TC12 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms