Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 RNA5SP412-201ENST00000516234 123 ntBASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 MIR5189-201ENST00000577370 114 ntBASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 CYP4F24P-201ENST00000586049 1580 ntBASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CFAP43Q8NDM7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC25.32■■□□□ 1.64
CFAP43Q8NDM7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 ZNF767P-206ENST00000513792 565 ntBASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC25.31■■□□□ 1.64
CFAP43Q8NDM7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 SDHAP3-202ENST00000515467 728 ntBASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
CFAP43Q8NDM7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC25.29■■□□□ 1.64
CFAP43Q8NDM7 AL136982.4-201ENST00000437689 1740 ntBASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms