Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 RHOQP3-201ENST00000437982 621 ntBASIC16.98■□□□□ 0.31
PAF1Q8N7H5 PGAM5P1-201ENST00000518923 814 ntBASIC16.98■□□□□ 0.31
PAF1Q8N7H5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 MPDU1-223ENST00000582151 728 ntBASIC16.98■□□□□ 0.31
PAF1Q8N7H5 AC010327.4-202ENST00000591484 748 ntBASIC16.98■□□□□ 0.31
PAF1Q8N7H5 AC068137.2-201ENST00000605408 478 ntBASIC16.98■□□□□ 0.31
PAF1Q8N7H5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PAF1Q8N7H5 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PAF1Q8N7H5 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PAF1Q8N7H5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.96■□□□□ 0.31
PAF1Q8N7H5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PAF1Q8N7H5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.96■□□□□ 0.31
PAF1Q8N7H5 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PAF1Q8N7H5 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.96■□□□□ 0.31
PAF1Q8N7H5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PAF1Q8N7H5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
PAF1Q8N7H5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PAF1Q8N7H5 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.96■□□□□ 0.31
PAF1Q8N7H5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PAF1Q8N7H5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PAF1Q8N7H5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms