Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAM1L1Q8N609 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 FAM220BP-201ENST00000377689 816 ntBASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 HLA-H-201ENST00000383620 1096 ntBASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 AC092183.1-201ENST00000469884 875 ntBASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 HLA-J-203ENST00000494367 1087 ntBASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 ALG1L8P-201ENST00000533887 760 ntBASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRAM1L1Q8N609 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 LINC00628-201ENST00000628516 1289 ntBASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 AL592424.1-201ENST00000563624 1536 ntBASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAM1L1Q8N609 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 KRT18P28-201ENST00000453838 1332 ntBASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAM1L1Q8N609 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms