Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBA1AQ71U36 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 RBM17P3-201ENST00000417687 1192 ntBASIC15.3■□□□□ 0.04
TUBA1AQ71U36 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 FAAHP1-202ENST00000446499 1238 ntBASIC15.3■□□□□ 0.04
TUBA1AQ71U36 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 AC002558.1-201ENST00000488906 803 ntBASIC15.3■□□□□ 0.04
TUBA1AQ71U36 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 NKAPP1-205ENST00000585790 367 ntBASIC15.3■□□□□ 0.04
TUBA1AQ71U36 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 AC148477.5-201ENST00000625164 1645 ntBASIC15.3■□□□□ 0.04
TUBA1AQ71U36 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1AQ71U36 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 AL391256.1-201ENST00000443260 1855 ntBASIC15.29■□□□□ 0.04
TUBA1AQ71U36 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 NORAD-201ENST00000565493 5339 ntBASIC15.29■□□□□ 0.04
TUBA1AQ71U36 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 AC009078.2-202ENST00000463353 338 ntBASIC15.29■□□□□ 0.04
TUBA1AQ71U36 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 STK19B-204ENST00000512515 211 ntBASIC15.29■□□□□ 0.04
TUBA1AQ71U36 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms