Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 TUBB8P12-201ENST00000308911 1335 ntBASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 TUBB7P-202ENST00000428444 1305 ntBASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 TUBB8P7-204ENST00000567960 1332 ntBASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.89■□□□□ 0.13
PPP4R4Q6NUP7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 AC132008.2-207ENST00000454517 770 ntBASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 IGHV3-52-201ENST00000519770 353 ntBASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 AC019129.2-201ENST00000609837 1235 ntBASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 GPR89P-201ENST00000407924 1495 ntBASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 AC006058.4-201ENST00000624016 1670 ntBASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 AC097374.2-201ENST00000618617 1306 ntBASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PPP4R4Q6NUP7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 AC010460.3-201ENST00000511359 1579 ntBASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 HLA-J-202ENST00000469281 1241 ntBASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PPP4R4Q6NUP7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms