Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATPAF1Q5TC12 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATPAF1Q5TC12 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATPAF1Q5TC12 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATPAF1Q5TC12 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.39□□□□□ -0.11
ATPAF1Q5TC12 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATPAF1Q5TC12 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 FRMD8P1-201ENST00000440433 1524 ntBASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 KRT18P27-201ENST00000427733 1299 ntBASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 RPS2P1-201ENST00000434010 821 ntBASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 HNRNPDP1-201ENST00000439535 754 ntBASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 AC008735.5-201ENST00000623544 497 ntBASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 AL590787.1-201ENST00000568856 1315 ntBASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATPAF1Q5TC12 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 AP002490.2-201ENST00000524791 560 ntBASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 AC006538.1-201ENST00000567905 1585 ntBASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATPAF1Q5TC12 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms