Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.94■□□□□ 0.14
HMGCS1Q01581 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGCS1Q01581 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGCS1Q01581 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGCS1Q01581 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGCS1Q01581 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGCS1Q01581 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGCS1Q01581 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGCS1Q01581 AC010654.1-201ENST00000615722 808 ntBASIC15.93■□□□□ 0.14
HMGCS1Q01581 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.93■□□□□ 0.14
HMGCS1Q01581 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGCS1Q01581 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGCS1Q01581 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGCS1Q01581 HYMAI-201ENST00000635591 3347 ntBASIC15.93■□□□□ 0.14
HMGCS1Q01581 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 AC026396.1-201ENST00000419388 421 ntBASIC15.92■□□□□ 0.14
HMGCS1Q01581 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 FAM185BP-201ENST00000443595 716 ntBASIC15.92■□□□□ 0.14
HMGCS1Q01581 POU5F1P6-201ENST00000466990 990 ntBASIC15.92■□□□□ 0.14
HMGCS1Q01581 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 MIR4751-201ENST00000578027 74 ntBASIC15.92■□□□□ 0.14
HMGCS1Q01581 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 MIR7706-201ENST00000613747 67 ntBASIC15.92■□□□□ 0.14
HMGCS1Q01581 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 AL603832.2-201ENST00000566195 2125 ntBASIC15.92■□□□□ 0.14
HMGCS1Q01581 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGCS1Q01581 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HMGCS1Q01581 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.91■□□□□ 0.14
HMGCS1Q01581 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms