Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
VSX2P58304 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
VSX2P58304 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.81■□□□□ 0.12
VSX2P58304 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VSX2P58304 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 HLA-J-202ENST00000469281 1241 ntBASIC15.81■□□□□ 0.12
VSX2P58304 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.81■□□□□ 0.12
VSX2P58304 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
VSX2P58304 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.81■□□□□ 0.12
VSX2P58304 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.81■□□□□ 0.12
VSX2P58304 UXT-AS1-201ENST00000590504 1525 ntBASIC15.81■□□□□ 0.12
VSX2P58304 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.81■□□□□ 0.12
VSX2P58304 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
VSX2P58304 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.81■□□□□ 0.12
VSX2P58304 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 AL391005.1-201ENST00000623953 2435 ntBASIC15.8■□□□□ 0.12
VSX2P58304 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VSX2P58304 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.8■□□□□ 0.12
VSX2P58304 HLA-A-202ENST00000376806 1854 ntBASIC15.8■□□□□ 0.12
VSX2P58304 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.8■□□□□ 0.12
VSX2P58304 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VSX2P58304 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.8■□□□□ 0.12
VSX2P58304 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.8■□□□□ 0.12
VSX2P58304 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
VSX2P58304 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.8■□□□□ 0.12
VSX2P58304 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
VSX2P58304 AL627223.1-201ENST00000416693 442 ntBASIC15.8■□□□□ 0.12
VSX2P58304 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.8■□□□□ 0.12
VSX2P58304 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.8■□□□□ 0.12
VSX2P58304 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.8■□□□□ 0.12
VSX2P58304 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 AC093520.2-201ENST00000561830 333 ntBASIC15.8■□□□□ 0.12
VSX2P58304 AL138918.1-201ENST00000568306 659 ntBASIC15.8■□□□□ 0.12
VSX2P58304 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
VSX2P58304 AC027307.2-201ENST00000591252 911 ntBASIC15.8■□□□□ 0.12
VSX2P58304 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
VSX2P58304 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
VSX2P58304 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VSX2P58304 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.79■□□□□ 0.12
VSX2P58304 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
VSX2P58304 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.79■□□□□ 0.12
VSX2P58304 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.79■□□□□ 0.12
VSX2P58304 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.79■□□□□ 0.12
VSX2P58304 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.79■□□□□ 0.12
VSX2P58304 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.79■□□□□ 0.12
VSX2P58304 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 KRT18P28-201ENST00000453838 1332 ntBASIC15.79■□□□□ 0.12
VSX2P58304 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.79■□□□□ 0.12
VSX2P58304 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.79■□□□□ 0.12
VSX2P58304 METTL21AP1-201ENST00000438852 635 ntBASIC15.79■□□□□ 0.12
VSX2P58304 AC023141.5-201ENST00000458585 616 ntBASIC15.79■□□□□ 0.12
VSX2P58304 AC069335.1-201ENST00000489972 472 ntBASIC15.79■□□□□ 0.12
VSX2P58304 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.79■□□□□ 0.12
VSX2P58304 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.79■□□□□ 0.12
VSX2P58304 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
VSX2P58304 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.79■□□□□ 0.12
VSX2P58304 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 AC008267.7-201ENST00000624570 1194 ntBASIC15.79■□□□□ 0.12
VSX2P58304 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
VSX2P58304 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
VSX2P58304 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.79■□□□□ 0.12
VSX2P58304 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 GPAA1P2-202ENST00000606848 1787 ntBASIC15.79■□□□□ 0.12
VSX2P58304 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VSX2P58304 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.79■□□□□ 0.12
VSX2P58304 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms