Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
RAB38P57729 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RAB38P57729 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 UXT-AS1-201ENST00000590504 1525 ntBASIC15.48■□□□□ 0.07
RAB38P57729 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB38P57729 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB38P57729 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RAB38P57729 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB38P57729 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RAB38P57729 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB38P57729 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
RAB38P57729 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB38P57729 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RAB38P57729 MIR346-201ENST00000362234 95 ntBASIC15.47■□□□□ 0.07
RAB38P57729 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB38P57729 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB38P57729 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.47■□□□□ 0.07
RAB38P57729 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.47■□□□□ 0.07
RAB38P57729 AL627223.1-201ENST00000416693 442 ntBASIC15.47■□□□□ 0.07
RAB38P57729 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB38P57729 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.47■□□□□ 0.07
RAB38P57729 AC142381.1-201ENST00000426099 345 ntBASIC15.47■□□□□ 0.07
RAB38P57729 RPS8P6-201ENST00000426177 609 ntBASIC15.47■□□□□ 0.07
RAB38P57729 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.47■□□□□ 0.07
RAB38P57729 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB38P57729 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB38P57729 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB38P57729 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RAB38P57729 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB38P57729 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.47■□□□□ 0.07
RAB38P57729 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.47■□□□□ 0.07
RAB38P57729 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB38P57729 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.47■□□□□ 0.07
RAB38P57729 AL596442.2-201ENST00000610240 980 ntBASIC15.47■□□□□ 0.07
RAB38P57729 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
RAB38P57729 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RAB38P57729 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB38P57729 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB38P57729 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 AL118508.1-201ENST00000613502 2345 ntBASIC15.46■□□□□ 0.07
RAB38P57729 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.46■□□□□ 0.07
RAB38P57729 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB38P57729 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB38P57729 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB38P57729 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.46■□□□□ 0.07
RAB38P57729 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RAB38P57729 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB38P57729 KRT18P32-201ENST00000424695 1287 ntBASIC15.46■□□□□ 0.07
RAB38P57729 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
RAB38P57729 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.46■□□□□ 0.07
RAB38P57729 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 AC006538.3-201ENST00000612495 578 ntBASIC15.46■□□□□ 0.07
RAB38P57729 SPTSSB-204ENST00000617024 1292 ntBASIC15.46■□□□□ 0.07
RAB38P57729 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.46■□□□□ 0.07
RAB38P57729 AC084121.4-201ENST00000641598 221 ntBASIC15.46■□□□□ 0.07
RAB38P57729 AF228730.8-201ENST00000642140 221 ntBASIC15.46■□□□□ 0.07
RAB38P57729 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RAB38P57729 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.46■□□□□ 0.07
RAB38P57729 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RAB38P57729 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB38P57729 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB38P57729 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.46■□□□□ 0.06
RAB38P57729 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB38P57729 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms