Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TUBB8P7-204ENST00000567960 1332 ntBASIC15.17■□□□□ 0.02
CLDN20P56880 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
CLDN20P56880 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN20P56880 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN20P56880 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN20P56880 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CLDN20P56880 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN20P56880 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 RPSAP43-201ENST00000402237 625 ntBASIC15.16■□□□□ 0.02
CLDN20P56880 UPF3AP3-201ENST00000420996 769 ntBASIC15.16■□□□□ 0.02
CLDN20P56880 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN20P56880 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 AC112482.1-201ENST00000492080 688 ntBASIC15.16■□□□□ 0.02
CLDN20P56880 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.16■□□□□ 0.02
CLDN20P56880 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.16■□□□□ 0.02
CLDN20P56880 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 AC091167.2-201ENST00000579581 588 ntBASIC15.16■□□□□ 0.02
CLDN20P56880 MPDU1-223ENST00000582151 728 ntBASIC15.16■□□□□ 0.02
CLDN20P56880 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
CLDN20P56880 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CLDN20P56880 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CLDN20P56880 AC078925.2-201ENST00000624013 1973 ntBASIC15.16■□□□□ 0.02
CLDN20P56880 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CLDN20P56880 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN20P56880 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN20P56880 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
CLDN20P56880 AC092171.3-201ENST00000610122 2651 ntBASIC15.16■□□□□ 0.02
CLDN20P56880 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN20P56880 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN20P56880 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLDN20P56880 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 RNF216P1-203ENST00000404404 2427 ntBASIC15.15■□□□□ 0.02
CLDN20P56880 AC131009.4-201ENST00000624048 1740 ntBASIC15.15■□□□□ 0.02
CLDN20P56880 TSPY26P-202ENST00000565928 3884 ntBASIC15.15■□□□□ 0.02
CLDN20P56880 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN20P56880 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CLDN20P56880 HMGA1P7-201ENST00000406908 502 ntBASIC15.15■□□□□ 0.02
CLDN20P56880 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN20P56880 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN20P56880 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN20P56880 ALG1L5P-201ENST00000482043 771 ntBASIC15.15■□□□□ 0.02
CLDN20P56880 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN20P56880 AL031432.2-201ENST00000566714 459 ntBASIC15.15■□□□□ 0.02
CLDN20P56880 AL928711.1-201ENST00000570165 459 ntBASIC15.15■□□□□ 0.02
CLDN20P56880 MIR3687-2-201ENST00000577708 61 ntBASIC15.15■□□□□ 0.02
CLDN20P56880 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN20P56880 AL078644.1-201ENST00000609881 752 ntBASIC15.15■□□□□ 0.02
CLDN20P56880 MIR3687-1-201ENST00000614492 61 ntBASIC15.15■□□□□ 0.02
CLDN20P56880 AL645728.2-201ENST00000641974 660 ntBASIC15.15■□□□□ 0.02
CLDN20P56880 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 AC012569.1-201ENST00000591191 1524 ntBASIC15.15■□□□□ 0.02
CLDN20P56880 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
CLDN20P56880 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN20P56880 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN20P56880 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN20P56880 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.02
CLDN20P56880 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN20P56880 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN20P56880 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN20P56880 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLDN20P56880 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms