Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN6P56747 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.77■□□□□ 0.12
CLDN6P56747 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN6P56747 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN6P56747 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN6P56747 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN6P56747 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN6P56747 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.77■□□□□ 0.12
CLDN6P56747 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN6P56747 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN6P56747 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN6P56747 AL023806.1-201ENST00000603994 1649 ntBASIC15.77■□□□□ 0.12
CLDN6P56747 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN6P56747 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN6P56747 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN6P56747 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN6P56747 AC245100.3-201ENST00000441281 285 ntBASIC15.77■□□□□ 0.12
CLDN6P56747 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN6P56747 AL606495.2-201ENST00000605867 535 ntBASIC15.77■□□□□ 0.12
CLDN6P56747 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.77■□□□□ 0.12
CLDN6P56747 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN6P56747 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN6P56747 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN6P56747 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN6P56747 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN6P56747 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN6P56747 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.77■□□□□ 0.11
CLDN6P56747 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.77■□□□□ 0.11
CLDN6P56747 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CLDN6P56747 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN6P56747 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN6P56747 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN6P56747 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN6P56747 AC012313.1-201ENST00000593393 3059 ntBASIC15.76■□□□□ 0.11
CLDN6P56747 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CLDN6P56747 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLDN6P56747 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CLDN6P56747 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN6P56747 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
CLDN6P56747 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CLDN6P56747 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN6P56747 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.76■□□□□ 0.11
CLDN6P56747 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN6P56747 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
CLDN6P56747 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.76■□□□□ 0.11
CLDN6P56747 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN6P56747 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.76■□□□□ 0.11
CLDN6P56747 CTBP2P3-201ENST00000585629 1255 ntBASIC15.76■□□□□ 0.11
CLDN6P56747 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN6P56747 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.76■□□□□ 0.11
CLDN6P56747 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN6P56747 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CLDN6P56747 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLDN6P56747 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN6P56747 AC092053.1-201ENST00000605787 1936 ntBASIC15.76■□□□□ 0.11
CLDN6P56747 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLDN6P56747 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN6P56747 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN6P56747 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN6P56747 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLDN6P56747 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDN6P56747 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLDN6P56747 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CLDN6P56747 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN6P56747 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN6P56747 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CLDN6P56747 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDN6P56747 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN6P56747 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN6P56747 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN6P56747 AC087499.6-201ENST00000411576 835 ntBASIC15.75■□□□□ 0.11
CLDN6P56747 AC098850.1-201ENST00000419919 790 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms