Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 RNF216P1-203ENST00000404404 2427 ntBASIC19.4■□□□□ 0.7
CACNB3P54284 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CACNB3P54284 UBALD1-205ENST00000590891 2641 ntBASIC19.39■□□□□ 0.7
CACNB3P54284 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CACNB3P54284 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CACNB3P54284 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CACNB3P54284 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CACNB3P54284 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CACNB3P54284 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CACNB3P54284 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CACNB3P54284 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CACNB3P54284 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CACNB3P54284 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CACNB3P54284 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNB3P54284 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNB3P54284 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.39■□□□□ 0.69
CACNB3P54284 AC098614.1-201ENST00000368528 745 ntBASIC19.39■□□□□ 0.69
CACNB3P54284 SPDYE17-201ENST00000412399 783 ntBASIC19.39■□□□□ 0.69
CACNB3P54284 SERBP1P3-201ENST00000459980 809 ntBASIC19.39■□□□□ 0.69
CACNB3P54284 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.39■□□□□ 0.69
CACNB3P54284 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.39■□□□□ 0.69
CACNB3P54284 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.39■□□□□ 0.69
CACNB3P54284 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CACNB3P54284 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.39■□□□□ 0.69
CACNB3P54284 IGHV3-71-201ENST00000523324 359 ntBASIC19.39■□□□□ 0.69
CACNB3P54284 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CACNB3P54284 AC023310.3-201ENST00000557027 670 ntBASIC19.39■□□□□ 0.69
CACNB3P54284 AC100756.1-201ENST00000562736 682 ntBASIC19.39■□□□□ 0.69
CACNB3P54284 AC138749.3-201ENST00000567691 622 ntBASIC19.39■□□□□ 0.69
CACNB3P54284 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.39■□□□□ 0.69
CACNB3P54284 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.39■□□□□ 0.69
CACNB3P54284 AC116165.1-201ENST00000611806 668 ntBASIC19.39■□□□□ 0.69
CACNB3P54284 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.39■□□□□ 0.69
CACNB3P54284 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.39■□□□□ 0.69
CACNB3P54284 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNB3P54284 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CACNB3P54284 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CACNB3P54284 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNB3P54284 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNB3P54284 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.39■□□□□ 0.69
CACNB3P54284 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNB3P54284 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CACNB3P54284 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNB3P54284 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CACNB3P54284 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.39■□□□□ 0.69
CACNB3P54284 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNB3P54284 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNB3P54284 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CACNB3P54284 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CACNB3P54284 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 AC005332.8-201ENST00000622750 2735 ntBASIC19.38■□□□□ 0.69
CACNB3P54284 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.38■□□□□ 0.69
CACNB3P54284 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CACNB3P54284 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.38■□□□□ 0.69
CACNB3P54284 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CACNB3P54284 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 AP006294.1-201ENST00000415407 339 ntBASIC19.38■□□□□ 0.69
CACNB3P54284 SLC7A15P-201ENST00000424028 1363 ntBASIC19.38■□□□□ 0.69
CACNB3P54284 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.38■□□□□ 0.69
CACNB3P54284 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.38■□□□□ 0.69
CACNB3P54284 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.38■□□□□ 0.69
CACNB3P54284 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.38■□□□□ 0.69
CACNB3P54284 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 AC093004.1-201ENST00000508850 424 ntBASIC19.38■□□□□ 0.69
CACNB3P54284 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.38■□□□□ 0.69
CACNB3P54284 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.38■□□□□ 0.69
CACNB3P54284 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.38■□□□□ 0.69
CACNB3P54284 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CACNB3P54284 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CACNB3P54284 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CACNB3P54284 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CACNB3P54284 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CACNB3P54284 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CACNB3P54284 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CACNB3P54284 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.37■□□□□ 0.69
CACNB3P54284 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.37■□□□□ 0.69
CACNB3P54284 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CACNB3P54284 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CACNB3P54284 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CACNB3P54284 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CACNB3P54284 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CACNB3P54284 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms