Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.03■□□□□ 0.32
NEK3P51956 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.03■□□□□ 0.32
NEK3P51956 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.03■□□□□ 0.32
NEK3P51956 AP001160.2-201ENST00000596071 487 ntBASIC17.03■□□□□ 0.32
NEK3P51956 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.03■□□□□ 0.32
NEK3P51956 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.03■□□□□ 0.32
NEK3P51956 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.03■□□□□ 0.32
NEK3P51956 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.03■□□□□ 0.32
NEK3P51956 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.03■□□□□ 0.32
NEK3P51956 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.03■□□□□ 0.32
NEK3P51956 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NEK3P51956 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NEK3P51956 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.03■□□□□ 0.32
NEK3P51956 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NEK3P51956 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEK3P51956 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEK3P51956 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.02■□□□□ 0.32
NEK3P51956 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NEK3P51956 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
NEK3P51956 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NEK3P51956 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NEK3P51956 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.02■□□□□ 0.32
NEK3P51956 TUBB8P12-201ENST00000308911 1335 ntBASIC17.02■□□□□ 0.32
NEK3P51956 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NEK3P51956 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEK3P51956 TUBB7P-202ENST00000428444 1305 ntBASIC17.02■□□□□ 0.32
NEK3P51956 TUBB8P7-204ENST00000567960 1332 ntBASIC17.02■□□□□ 0.32
NEK3P51956 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEK3P51956 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEK3P51956 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEK3P51956 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEK3P51956 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NEK3P51956 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.02■□□□□ 0.32
NEK3P51956 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEK3P51956 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.02■□□□□ 0.32
NEK3P51956 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
NEK3P51956 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.02■□□□□ 0.32
NEK3P51956 DNAJB3-202ENST00000449667 1266 ntBASIC17.02■□□□□ 0.32
NEK3P51956 AC092183.1-201ENST00000469884 875 ntBASIC17.02■□□□□ 0.32
NEK3P51956 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NEK3P51956 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.02■□□□□ 0.32
NEK3P51956 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.02■□□□□ 0.32
NEK3P51956 AL031432.2-201ENST00000566714 459 ntBASIC17.02■□□□□ 0.32
NEK3P51956 AL928711.1-201ENST00000570165 459 ntBASIC17.02■□□□□ 0.32
NEK3P51956 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.02■□□□□ 0.32
NEK3P51956 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.02■□□□□ 0.32
NEK3P51956 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
NEK3P51956 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.02■□□□□ 0.32
NEK3P51956 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEK3P51956 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
NEK3P51956 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.02■□□□□ 0.32
NEK3P51956 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.02■□□□□ 0.32
NEK3P51956 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NEK3P51956 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
NEK3P51956 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NEK3P51956 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.02■□□□□ 0.31
NEK3P51956 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NEK3P51956 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NEK3P51956 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.02■□□□□ 0.31
NEK3P51956 MTHFR-217ENST00000641820 1569 ntBASIC17.02■□□□□ 0.31
NEK3P51956 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NEK3P51956 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NEK3P51956 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.02■□□□□ 0.31
NEK3P51956 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 AL365203.3-201ENST00000609742 2057 ntBASIC17.01■□□□□ 0.31
NEK3P51956 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NEK3P51956 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.01■□□□□ 0.31
NEK3P51956 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NEK3P51956 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NEK3P51956 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.01■□□□□ 0.31
NEK3P51956 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NEK3P51956 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.01■□□□□ 0.31
NEK3P51956 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.01■□□□□ 0.31
NEK3P51956 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.01■□□□□ 0.31
NEK3P51956 DUX4L17-201ENST00000557360 1267 ntBASIC17.01■□□□□ 0.31
NEK3P51956 MIR4515-201ENST00000584082 81 ntBASIC17.01■□□□□ 0.31
NEK3P51956 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms