Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP11P51784 RARRES2P9-201ENST00000565168 469 ntBASIC18.58■□□□□ 0.56
USP11P51784 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP11P51784 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.58■□□□□ 0.56
USP11P51784 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.58■□□□□ 0.56
USP11P51784 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP11P51784 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP11P51784 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP11P51784 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
USP11P51784 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.58■□□□□ 0.56
USP11P51784 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP11P51784 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP11P51784 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP11P51784 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.58■□□□□ 0.56
USP11P51784 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
USP11P51784 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.57■□□□□ 0.56
USP11P51784 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP11P51784 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP11P51784 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.57■□□□□ 0.56
USP11P51784 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP11P51784 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.57■□□□□ 0.56
USP11P51784 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP11P51784 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
USP11P51784 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
USP11P51784 SPDYE14P-201ENST00000442619 822 ntBASIC18.57■□□□□ 0.56
USP11P51784 AC109322.1-201ENST00000524499 1264 ntBASIC18.57■□□□□ 0.56
USP11P51784 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
USP11P51784 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
USP11P51784 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
USP11P51784 AC024267.1-201ENST00000582320 895 ntBASIC18.57■□□□□ 0.56
USP11P51784 AL365330.1-201ENST00000607459 531 ntBASIC18.57■□□□□ 0.56
USP11P51784 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.57■□□□□ 0.56
USP11P51784 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP11P51784 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
USP11P51784 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP11P51784 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP11P51784 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP11P51784 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP11P51784 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
USP11P51784 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP11P51784 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP11P51784 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
USP11P51784 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP11P51784 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP11P51784 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.56■□□□□ 0.56
USP11P51784 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP11P51784 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP11P51784 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
USP11P51784 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
USP11P51784 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
USP11P51784 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
USP11P51784 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP11P51784 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.56■□□□□ 0.56
USP11P51784 AC025678.2-201ENST00000562061 970 ntBASIC18.56■□□□□ 0.56
USP11P51784 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.56■□□□□ 0.56
USP11P51784 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.56■□□□□ 0.56
USP11P51784 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP11P51784 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.56■□□□□ 0.56
USP11P51784 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.56■□□□□ 0.56
USP11P51784 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP11P51784 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
USP11P51784 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP11P51784 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP11P51784 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP11P51784 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
USP11P51784 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP11P51784 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP11P51784 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.56■□□□□ 0.56
USP11P51784 REXO1L8P-201ENST00000604378 1897 ntBASIC18.56■□□□□ 0.56
USP11P51784 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP11P51784 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.55■□□□□ 0.56
USP11P51784 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.55■□□□□ 0.56
USP11P51784 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.55■□□□□ 0.56
USP11P51784 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.55■□□□□ 0.56
USP11P51784 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
USP11P51784 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.55■□□□□ 0.56
USP11P51784 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.55■□□□□ 0.56
USP11P51784 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.55■□□□□ 0.56
USP11P51784 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.55■□□□□ 0.56
USP11P51784 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.55■□□□□ 0.56
USP11P51784 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.55■□□□□ 0.56
USP11P51784 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.55■□□□□ 0.56
USP11P51784 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
USP11P51784 AC069262.1-201ENST00000539058 672 ntBASIC18.55■□□□□ 0.56
USP11P51784 AC061975.2-201ENST00000581722 295 ntBASIC18.55■□□□□ 0.56
USP11P51784 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.55■□□□□ 0.56
USP11P51784 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP11P51784 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
USP11P51784 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
USP11P51784 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms