Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC11.13□□□□□ -0.63
PCP4P48539 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
PCP4P48539 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.12□□□□□ -0.63
PCP4P48539 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
PCP4P48539 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC11.12□□□□□ -0.63
PCP4P48539 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
PCP4P48539 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC11.12□□□□□ -0.63
PCP4P48539 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
PCP4P48539 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.12□□□□□ -0.63
PCP4P48539 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
PCP4P48539 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC11.12□□□□□ -0.63
PCP4P48539 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
PCP4P48539 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC11.12□□□□□ -0.63
PCP4P48539 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC11.12□□□□□ -0.63
PCP4P48539 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.12□□□□□ -0.63
PCP4P48539 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 AC020658.7-201ENST00000624274 2442 ntBASIC11.12□□□□□ -0.63
PCP4P48539 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC11.12□□□□□ -0.63
PCP4P48539 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.12□□□□□ -0.63
PCP4P48539 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC11.12□□□□□ -0.63
PCP4P48539 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.12□□□□□ -0.63
PCP4P48539 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
PCP4P48539 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
PCP4P48539 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC11.12□□□□□ -0.63
PCP4P48539 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.12□□□□□ -0.63
PCP4P48539 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.12□□□□□ -0.63
PCP4P48539 LINC00304-203ENST00000565008 1864 ntBASIC11.12□□□□□ -0.63
PCP4P48539 FGD5P1-202ENST00000614866 2498 ntBASIC11.12□□□□□ -0.63
PCP4P48539 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
PCP4P48539 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 AL645937.6-201ENST00000641122 3727 ntBASIC11.11□□□□□ -0.63
PCP4P48539 GRPEL2-201ENST00000329271 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
PCP4P48539 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 AC133065.6-201ENST00000625054 2378 ntBASIC11.11□□□□□ -0.63
PCP4P48539 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
PCP4P48539 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
PCP4P48539 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC11.11□□□□□ -0.63
PCP4P48539 TP53AIP1-206ENST00000602346 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
PCP4P48539 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.11□□□□□ -0.63
PCP4P48539 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
PCP4P48539 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PCP4P48539 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms