Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GRIA1P42261 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.73■□□□□ 0.27
GRIA1P42261 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.73■□□□□ 0.27
GRIA1P42261 AL031055.1-201ENST00000606362 631 ntBASIC16.73■□□□□ 0.27
GRIA1P42261 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.73■□□□□ 0.27
GRIA1P42261 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.73■□□□□ 0.27
GRIA1P42261 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
GRIA1P42261 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.73■□□□□ 0.27
GRIA1P42261 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.73■□□□□ 0.27
GRIA1P42261 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
GRIA1P42261 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
GRIA1P42261 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.72■□□□□ 0.27
GRIA1P42261 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GRIA1P42261 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
GRIA1P42261 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GRIA1P42261 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.72■□□□□ 0.27
GRIA1P42261 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GRIA1P42261 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.72■□□□□ 0.27
GRIA1P42261 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GRIA1P42261 AC093909.1-201ENST00000504731 1122 ntBASIC16.72■□□□□ 0.27
GRIA1P42261 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.72■□□□□ 0.27
GRIA1P42261 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.72■□□□□ 0.27
GRIA1P42261 AL031432.2-201ENST00000566714 459 ntBASIC16.72■□□□□ 0.27
GRIA1P42261 AL928711.1-201ENST00000570165 459 ntBASIC16.72■□□□□ 0.27
GRIA1P42261 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GRIA1P42261 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.72■□□□□ 0.27
GRIA1P42261 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.72■□□□□ 0.27
GRIA1P42261 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.72■□□□□ 0.27
GRIA1P42261 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.72■□□□□ 0.27
GRIA1P42261 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GRIA1P42261 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.72■□□□□ 0.27
GRIA1P42261 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA1P42261 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GRIA1P42261 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
GRIA1P42261 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
GRIA1P42261 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIA1P42261 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA1P42261 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA1P42261 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA1P42261 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
GRIA1P42261 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA1P42261 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA1P42261 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA1P42261 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
GRIA1P42261 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIA1P42261 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
GRIA1P42261 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.71■□□□□ 0.27
GRIA1P42261 RHOQP3-201ENST00000437982 621 ntBASIC16.71■□□□□ 0.27
GRIA1P42261 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA1P42261 AL662844.1-201ENST00000546340 181 ntBASIC16.71■□□□□ 0.27
GRIA1P42261 AL645728.2-201ENST00000641974 660 ntBASIC16.71■□□□□ 0.27
GRIA1P42261 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA1P42261 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.71■□□□□ 0.27
GRIA1P42261 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA1P42261 AC105917.1-201ENST00000506637 2539 ntBASIC16.71■□□□□ 0.27
GRIA1P42261 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA1P42261 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIA1P42261 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA1P42261 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
GRIA1P42261 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA1P42261 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
GRIA1P42261 HYMAI-201ENST00000635591 3347 ntBASIC16.71■□□□□ 0.27
GRIA1P42261 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
GRIA1P42261 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA1P42261 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIA1P42261 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
GRIA1P42261 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.26
GRIA1P42261 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
GRIA1P42261 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms