Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFC5P40937 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
RFC5P40937 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.16■□□□□ 0.5
RFC5P40937 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC5P40937 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC5P40937 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
RFC5P40937 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC5P40937 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC5P40937 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC5P40937 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC5P40937 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC5P40937 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.16■□□□□ 0.5
RFC5P40937 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC5P40937 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.16■□□□□ 0.5
RFC5P40937 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC5P40937 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 AC018695.7-201ENST00000624587 2492 ntBASIC18.15■□□□□ 0.5
RFC5P40937 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
RFC5P40937 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RFC5P40937 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC5P40937 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.15■□□□□ 0.5
RFC5P40937 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.15■□□□□ 0.5
RFC5P40937 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 AC107890.1-201ENST00000422478 521 ntBASIC18.15■□□□□ 0.5
RFC5P40937 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC5P40937 RNA5SP410-201ENST00000516285 106 ntBASIC18.15■□□□□ 0.5
RFC5P40937 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.15■□□□□ 0.5
RFC5P40937 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC5P40937 AC140878.1-201ENST00000565277 250 ntBASIC18.15■□□□□ 0.5
RFC5P40937 AC024267.1-201ENST00000582320 895 ntBASIC18.15■□□□□ 0.5
RFC5P40937 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC5P40937 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
RFC5P40937 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC5P40937 AD000864.1-201ENST00000624076 2295 ntBASIC18.15■□□□□ 0.5
RFC5P40937 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC5P40937 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.14■□□□□ 0.5
RFC5P40937 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RFC5P40937 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
RFC5P40937 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RFC5P40937 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
RFC5P40937 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC5P40937 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
RFC5P40937 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC5P40937 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC5P40937 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC5P40937 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC5P40937 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC5P40937 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RFC5P40937 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RFC5P40937 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RFC5P40937 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.14■□□□□ 0.49
RFC5P40937 AL353705.2-201ENST00000428243 662 ntBASIC18.14■□□□□ 0.49
RFC5P40937 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.14■□□□□ 0.49
RFC5P40937 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.14■□□□□ 0.49
RFC5P40937 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
RFC5P40937 AC003101.2-201ENST00000612557 442 ntBASIC18.14■□□□□ 0.49
RFC5P40937 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC5P40937 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.14■□□□□ 0.49
RFC5P40937 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC5P40937 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RFC5P40937 AC005622.1-201ENST00000636801 1703 ntBASIC18.14■□□□□ 0.49
RFC5P40937 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC5P40937 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.14■□□□□ 0.49
RFC5P40937 UBALD1-205ENST00000590891 2641 ntBASIC18.14■□□□□ 0.49
RFC5P40937 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.14■□□□□ 0.49
RFC5P40937 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC5P40937 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC5P40937 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC5P40937 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.13■□□□□ 0.49
RFC5P40937 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC5P40937 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFC5P40937 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC5P40937 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.13■□□□□ 0.49
RFC5P40937 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RFC5P40937 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFC5P40937 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC5P40937 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RFC5P40937 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC5P40937 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.13■□□□□ 0.49
RFC5P40937 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.13■□□□□ 0.49
RFC5P40937 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFC5P40937 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC5P40937 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.13■□□□□ 0.49
RFC5P40937 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFC5P40937 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.13■□□□□ 0.49
RFC5P40937 HMGN1P19-201ENST00000436976 333 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms