Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MDH1P40925 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.61■□□□□ 0.25
MDH1P40925 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MDH1P40925 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.61■□□□□ 0.25
MDH1P40925 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
MDH1P40925 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MDH1P40925 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 NFIC-211ENST00000641145 8399 ntBASIC16.61■□□□□ 0.25
MDH1P40925 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.61■□□□□ 0.25
MDH1P40925 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
MDH1P40925 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.61■□□□□ 0.25
MDH1P40925 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MDH1P40925 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.61■□□□□ 0.25
MDH1P40925 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
MDH1P40925 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.6■□□□□ 0.25
MDH1P40925 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.6■□□□□ 0.25
MDH1P40925 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MDH1P40925 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.6■□□□□ 0.25
MDH1P40925 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.6■□□□□ 0.25
MDH1P40925 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.6■□□□□ 0.25
MDH1P40925 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.6■□□□□ 0.25
MDH1P40925 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MDH1P40925 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
MDH1P40925 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.6■□□□□ 0.25
MDH1P40925 AC026396.1-201ENST00000419388 421 ntBASIC16.6■□□□□ 0.25
MDH1P40925 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MDH1P40925 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 AC005332.3-201ENST00000589904 676 ntBASIC16.6■□□□□ 0.25
MDH1P40925 AL390719.2-201ENST00000606993 987 ntBASIC16.6■□□□□ 0.25
MDH1P40925 PGM5P2-202ENST00000637225 1043 ntBASIC16.6■□□□□ 0.25
MDH1P40925 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.6■□□□□ 0.25
MDH1P40925 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
MDH1P40925 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MDH1P40925 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.6■□□□□ 0.25
MDH1P40925 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.6■□□□□ 0.25
MDH1P40925 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.6■□□□□ 0.25
MDH1P40925 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
MDH1P40925 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.6■□□□□ 0.25
MDH1P40925 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MDH1P40925 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MDH1P40925 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.59■□□□□ 0.25
MDH1P40925 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.59■□□□□ 0.25
MDH1P40925 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MDH1P40925 GPAA1P2-202ENST00000606848 1787 ntBASIC16.59■□□□□ 0.25
MDH1P40925 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 AC067930.6-201ENST00000623257 4947 ntBASIC16.59■□□□□ 0.25
MDH1P40925 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
MDH1P40925 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.59■□□□□ 0.25
MDH1P40925 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MDH1P40925 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 PRORSD1P-201ENST00000295112 541 ntBASIC16.59■□□□□ 0.25
MDH1P40925 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
MDH1P40925 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.59■□□□□ 0.25
MDH1P40925 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MDH1P40925 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 AC142381.4-202ENST00000563973 229 ntBASIC16.59■□□□□ 0.25
MDH1P40925 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.59■□□□□ 0.25
MDH1P40925 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.59■□□□□ 0.25
MDH1P40925 AD001527.2-201ENST00000622994 785 ntBASIC16.59■□□□□ 0.25
MDH1P40925 AC068587.6-202ENST00000641839 5619 ntBASIC16.59■□□□□ 0.25
MDH1P40925 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
MDH1P40925 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.59■□□□□ 0.25
MDH1P40925 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MDH1P40925 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
MDH1P40925 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.59■□□□□ 0.25
MDH1P40925 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MDH1P40925 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms