Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PDE6BP35913 AC134043.2-201ENST00000624206 2238 ntBASIC20.12■□□□□ 0.81
PDE6BP35913 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PDE6BP35913 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 AC138932.1-201ENST00000534164 6830 ntBASIC20.12■□□□□ 0.81
PDE6BP35913 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
PDE6BP35913 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PDE6BP35913 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PDE6BP35913 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE6BP35913 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE6BP35913 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.11■□□□□ 0.81
PDE6BP35913 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PDE6BP35913 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE6BP35913 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.11■□□□□ 0.81
PDE6BP35913 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE6BP35913 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDE6BP35913 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
PDE6BP35913 RN7SL399P-201ENST00000471648 279 ntBASIC20.11■□□□□ 0.81
PDE6BP35913 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC20.11■□□□□ 0.81
PDE6BP35913 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.11■□□□□ 0.81
PDE6BP35913 MIR6787-201ENST00000616675 61 ntBASIC20.11■□□□□ 0.81
PDE6BP35913 MIR6869-201ENST00000619434 62 ntBASIC20.11■□□□□ 0.81
PDE6BP35913 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PDE6BP35913 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE6BP35913 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PDE6BP35913 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE6BP35913 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.11■□□□□ 0.81
PDE6BP35913 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE6BP35913 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE6BP35913 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.11■□□□□ 0.81
PDE6BP35913 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE6BP35913 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE6BP35913 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE6BP35913 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.11■□□□□ 0.81
PDE6BP35913 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PDE6BP35913 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
PDE6BP35913 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.1■□□□□ 0.81
PDE6BP35913 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.1■□□□□ 0.81
PDE6BP35913 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDE6BP35913 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.1■□□□□ 0.81
PDE6BP35913 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.1■□□□□ 0.81
PDE6BP35913 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDE6BP35913 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 KLF2P4-201ENST00000451959 1225 ntBASIC20.1■□□□□ 0.81
PDE6BP35913 CTBP2P5-201ENST00000454986 1264 ntBASIC20.1■□□□□ 0.81
PDE6BP35913 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.1■□□□□ 0.81
PDE6BP35913 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.1■□□□□ 0.81
PDE6BP35913 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PDE6BP35913 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.1■□□□□ 0.81
PDE6BP35913 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.1■□□□□ 0.81
PDE6BP35913 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.1■□□□□ 0.81
PDE6BP35913 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.1■□□□□ 0.81
PDE6BP35913 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.1■□□□□ 0.81
PDE6BP35913 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.1■□□□□ 0.81
PDE6BP35913 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDE6BP35913 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
PDE6BP35913 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDE6BP35913 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.1■□□□□ 0.81
PDE6BP35913 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.1■□□□□ 0.81
PDE6BP35913 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PDE6BP35913 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.1■□□□□ 0.81
PDE6BP35913 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.1■□□□□ 0.81
PDE6BP35913 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDE6BP35913 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE6BP35913 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDE6BP35913 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.09■□□□□ 0.81
PDE6BP35913 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6BP35913 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6BP35913 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PDE6BP35913 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6BP35913 AL031731.1-201ENST00000642131 2094 ntBASIC20.09■□□□□ 0.81
PDE6BP35913 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6BP35913 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6BP35913 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
PDE6BP35913 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PDE6BP35913 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PDE6BP35913 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6BP35913 PDIA3P1-201ENST00000471856 1510 ntBASIC20.09■□□□□ 0.81
PDE6BP35913 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE6BP35913 MIR1908-201ENST00000410394 80 ntBASIC20.09■□□□□ 0.81
PDE6BP35913 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms