Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNNA1P35221 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CTNNA1P35221 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.48■□□□□ 0.39
CTNNA1P35221 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNNA1P35221 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 LAGE3P1-201ENST00000425356 484 ntBASIC17.48■□□□□ 0.39
CTNNA1P35221 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.48■□□□□ 0.39
CTNNA1P35221 AC021087.4-201ENST00000563761 564 ntBASIC17.48■□□□□ 0.39
CTNNA1P35221 AC091304.2-201ENST00000564639 760 ntBASIC17.48■□□□□ 0.39
CTNNA1P35221 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNNA1P35221 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.48■□□□□ 0.39
CTNNA1P35221 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CTNNA1P35221 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNNA1P35221 AL353732.1-201ENST00000569618 1459 ntBASIC17.48■□□□□ 0.39
CTNNA1P35221 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CTNNA1P35221 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CTNNA1P35221 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.48■□□□□ 0.39
CTNNA1P35221 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CTNNA1P35221 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CTNNA1P35221 GPAA1P2-202ENST00000606848 1787 ntBASIC17.48■□□□□ 0.39
CTNNA1P35221 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CTNNA1P35221 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CTNNA1P35221 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNNA1P35221 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNNA1P35221 AC006449.6-201ENST00000612330 2296 ntBASIC17.47■□□□□ 0.39
CTNNA1P35221 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTNNA1P35221 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTNNA1P35221 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CTNNA1P35221 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNNA1P35221 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNNA1P35221 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTNNA1P35221 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CTNNA1P35221 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.47■□□□□ 0.39
CTNNA1P35221 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.47■□□□□ 0.39
CTNNA1P35221 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.47■□□□□ 0.39
CTNNA1P35221 AC006557.2-201ENST00000592985 1240 ntBASIC17.47■□□□□ 0.39
CTNNA1P35221 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNNA1P35221 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
CTNNA1P35221 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.47■□□□□ 0.39
CTNNA1P35221 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
CTNNA1P35221 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNNA1P35221 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNNA1P35221 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNNA1P35221 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTNNA1P35221 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTNNA1P35221 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNNA1P35221 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNNA1P35221 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNNA1P35221 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTNNA1P35221 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNNA1P35221 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNNA1P35221 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNNA1P35221 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CTNNA1P35221 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.47■□□□□ 0.39
CTNNA1P35221 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNNA1P35221 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CTNNA1P35221 AC144831.1-201ENST00000573312 2656 ntBASIC17.46■□□□□ 0.39
CTNNA1P35221 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTNNA1P35221 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.46■□□□□ 0.39
CTNNA1P35221 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.46■□□□□ 0.39
CTNNA1P35221 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.46■□□□□ 0.39
CTNNA1P35221 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNNA1P35221 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.46■□□□□ 0.39
CTNNA1P35221 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.46■□□□□ 0.39
CTNNA1P35221 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNNA1P35221 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNNA1P35221 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CTNNA1P35221 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNNA1P35221 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNNA1P35221 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.46■□□□□ 0.39
CTNNA1P35221 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.46■□□□□ 0.39
CTNNA1P35221 SAPCD2P3-201ENST00000455031 850 ntBASIC17.46■□□□□ 0.39
CTNNA1P35221 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.46■□□□□ 0.39
CTNNA1P35221 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.46■□□□□ 0.39
CTNNA1P35221 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.46■□□□□ 0.39
CTNNA1P35221 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.46■□□□□ 0.39
CTNNA1P35221 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.46■□□□□ 0.39
CTNNA1P35221 AC107918.4-202ENST00000641623 219 ntBASIC17.46■□□□□ 0.39
CTNNA1P35221 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNNA1P35221 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.46■□□□□ 0.39
CTNNA1P35221 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTNNA1P35221 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CTNNA1P35221 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CTNNA1P35221 PCGF3-213ENST00000620529 1899 ntBASIC17.46■□□□□ 0.38
CTNNA1P35221 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CTNNA1P35221 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNNA1P35221 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms