Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXA6P31267 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.08■□□□□ 0.16
HOXA6P31267 AL136982.4-201ENST00000437689 1740 ntBASIC16.08■□□□□ 0.16
HOXA6P31267 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXA6P31267 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXA6P31267 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXA6P31267 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.08■□□□□ 0.16
HOXA6P31267 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.08■□□□□ 0.16
HOXA6P31267 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXA6P31267 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXA6P31267 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
HOXA6P31267 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXA6P31267 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
HOXA6P31267 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXA6P31267 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXA6P31267 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.07■□□□□ 0.16
HOXA6P31267 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXA6P31267 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.07■□□□□ 0.16
HOXA6P31267 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXA6P31267 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.07■□□□□ 0.16
HOXA6P31267 TDH-203ENST00000531764 1110 ntBASIC16.07■□□□□ 0.16
HOXA6P31267 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HOXA6P31267 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXA6P31267 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXA6P31267 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.07■□□□□ 0.16
HOXA6P31267 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXA6P31267 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HOXA6P31267 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HOXA6P31267 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXA6P31267 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXA6P31267 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXA6P31267 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
HOXA6P31267 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXA6P31267 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXA6P31267 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
HOXA6P31267 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXA6P31267 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.06■□□□□ 0.16
HOXA6P31267 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXA6P31267 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
HOXA6P31267 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HOXA6P31267 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.06■□□□□ 0.16
HOXA6P31267 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXA6P31267 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HOXA6P31267 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HOXA6P31267 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXA6P31267 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 PFN1P12-201ENST00000455938 534 ntBASIC16.06■□□□□ 0.16
HOXA6P31267 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.06■□□□□ 0.16
HOXA6P31267 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.06■□□□□ 0.16
HOXA6P31267 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXA6P31267 AC079316.1-201ENST00000548397 411 ntBASIC16.06■□□□□ 0.16
HOXA6P31267 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.06■□□□□ 0.16
HOXA6P31267 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.06■□□□□ 0.16
HOXA6P31267 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HOXA6P31267 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.06■□□□□ 0.16
HOXA6P31267 AC068587.10-201ENST00000641210 219 ntBASIC16.06■□□□□ 0.16
HOXA6P31267 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
HOXA6P31267 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXA6P31267 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HOXA6P31267 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXA6P31267 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HOXA6P31267 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.05■□□□□ 0.16
HOXA6P31267 GGT4P-201ENST00000623672 1708 ntBASIC16.05■□□□□ 0.16
HOXA6P31267 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.05■□□□□ 0.16
HOXA6P31267 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXA6P31267 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HOXA6P31267 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXA6P31267 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HOXA6P31267 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.05■□□□□ 0.16
HOXA6P31267 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXA6P31267 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXA6P31267 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms