Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 AC006538.1-201ENST00000567905 1585 ntBASIC19.8■□□□□ 0.76
LMNB1P20700 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.8■□□□□ 0.76
LMNB1P20700 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.8■□□□□ 0.76
LMNB1P20700 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.8■□□□□ 0.76
LMNB1P20700 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.8■□□□□ 0.76
LMNB1P20700 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.8■□□□□ 0.76
LMNB1P20700 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
LMNB1P20700 C2orf69P2-201ENST00000562032 1123 ntBASIC19.8■□□□□ 0.76
LMNB1P20700 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.8■□□□□ 0.76
LMNB1P20700 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 AC013467.2-201ENST00000605472 835 ntBASIC19.8■□□□□ 0.76
LMNB1P20700 AC106872.11-201ENST00000605838 421 ntBASIC19.8■□□□□ 0.76
LMNB1P20700 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.8■□□□□ 0.76
LMNB1P20700 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LMNB1P20700 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.8■□□□□ 0.76
LMNB1P20700 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LMNB1P20700 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LMNB1P20700 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
LMNB1P20700 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LMNB1P20700 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.79■□□□□ 0.76
LMNB1P20700 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LMNB1P20700 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LMNB1P20700 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.79■□□□□ 0.76
LMNB1P20700 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.79■□□□□ 0.76
LMNB1P20700 YBX1P6-201ENST00000442962 1002 ntBASIC19.79■□□□□ 0.76
LMNB1P20700 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.79■□□□□ 0.76
LMNB1P20700 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.79■□□□□ 0.76
LMNB1P20700 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.79■□□□□ 0.76
LMNB1P20700 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.79■□□□□ 0.76
LMNB1P20700 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.79■□□□□ 0.76
LMNB1P20700 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.79■□□□□ 0.76
LMNB1P20700 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.79■□□□□ 0.76
LMNB1P20700 AC010328.2-201ENST00000597698 1111 ntBASIC19.79■□□□□ 0.76
LMNB1P20700 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 AC068880.1-201ENST00000507289 2297 ntBASIC19.79■□□□□ 0.76
LMNB1P20700 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 AC026471.1-201ENST00000564629 3026 ntBASIC19.79■□□□□ 0.76
LMNB1P20700 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 AC006277.1-201ENST00000624348 1610 ntBASIC19.79■□□□□ 0.76
LMNB1P20700 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.79■□□□□ 0.76
LMNB1P20700 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LMNB1P20700 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
LMNB1P20700 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMNB1P20700 LETM1P2-201ENST00000597330 2178 ntBASIC19.78■□□□□ 0.76
LMNB1P20700 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.78■□□□□ 0.76
LMNB1P20700 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMNB1P20700 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.78■□□□□ 0.76
LMNB1P20700 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMNB1P20700 KRT8P39-201ENST00000396270 1433 ntBASIC19.78■□□□□ 0.76
LMNB1P20700 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMNB1P20700 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMNB1P20700 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.78■□□□□ 0.76
LMNB1P20700 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LMNB1P20700 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LMNB1P20700 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
LMNB1P20700 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMNB1P20700 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.78■□□□□ 0.76
LMNB1P20700 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LMNB1P20700 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.78■□□□□ 0.76
LMNB1P20700 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.78■□□□□ 0.76
LMNB1P20700 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.78■□□□□ 0.76
LMNB1P20700 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LMNB1P20700 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LMNB1P20700 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMNB1P20700 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
LMNB1P20700 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.78■□□□□ 0.76
LMNB1P20700 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LMNB1P20700 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LMNB1P20700 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMNB1P20700 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LMNB1P20700 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LMNB1P20700 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms