Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
KRT4P19013 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT4P19013 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KRT4P19013 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
KRT4P19013 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT4P19013 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
KRT4P19013 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT4P19013 AC074051.2-201ENST00000565115 352 ntBASIC16.61■□□□□ 0.25
KRT4P19013 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT4P19013 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT4P19013 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT4P19013 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT4P19013 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT4P19013 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT4P19013 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
KRT4P19013 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
KRT4P19013 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
KRT4P19013 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT4P19013 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT4P19013 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT4P19013 NCF1C-201ENST00000438382 1427 ntBASIC16.61■□□□□ 0.25
KRT4P19013 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
KRT4P19013 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT4P19013 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KRT4P19013 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT4P19013 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT4P19013 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT4P19013 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT4P19013 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
KRT4P19013 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.6■□□□□ 0.25
KRT4P19013 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT4P19013 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT4P19013 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
KRT4P19013 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT4P19013 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT4P19013 AC131009.4-201ENST00000624048 1740 ntBASIC16.6■□□□□ 0.25
KRT4P19013 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
KRT4P19013 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT4P19013 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT4P19013 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT4P19013 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT4P19013 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KRT4P19013 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KRT4P19013 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT4P19013 PAWRP1-201ENST00000451083 565 ntBASIC16.6■□□□□ 0.25
KRT4P19013 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.6■□□□□ 0.25
KRT4P19013 RN7SL850P-201ENST00000579959 291 ntBASIC16.6■□□□□ 0.25
KRT4P19013 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.6■□□□□ 0.25
KRT4P19013 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT4P19013 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT4P19013 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT4P19013 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KRT4P19013 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT4P19013 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
KRT4P19013 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT4P19013 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
KRT4P19013 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
KRT4P19013 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT4P19013 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT4P19013 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT4P19013 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT4P19013 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
KRT4P19013 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT4P19013 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT4P19013 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
KRT4P19013 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT4P19013 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
KRT4P19013 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
KRT4P19013 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT4P19013 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT4P19013 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT4P19013 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT4P19013 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT4P19013 BX005266.1-201ENST00000473402 457 ntBASIC16.59■□□□□ 0.25
KRT4P19013 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT4P19013 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT4P19013 MIR5100-201ENST00000579544 119 ntBASIC16.59■□□□□ 0.25
KRT4P19013 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT4P19013 AC092329.2-201ENST00000598402 547 ntBASIC16.59■□□□□ 0.25
KRT4P19013 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT4P19013 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT4P19013 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
KRT4P19013 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms