Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
H2AFXP16104 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
H2AFXP16104 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2AFXP16104 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.14■□□□□ 0.33
H2AFXP16104 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2AFXP16104 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2AFXP16104 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2AFXP16104 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.14■□□□□ 0.33
H2AFXP16104 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.14■□□□□ 0.33
H2AFXP16104 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.13■□□□□ 0.33
H2AFXP16104 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
H2AFXP16104 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2AFXP16104 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2AFXP16104 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.13■□□□□ 0.33
H2AFXP16104 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.13■□□□□ 0.33
H2AFXP16104 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2AFXP16104 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2AFXP16104 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2AFXP16104 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
H2AFXP16104 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.13■□□□□ 0.33
H2AFXP16104 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2AFXP16104 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
H2AFXP16104 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2AFXP16104 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.13■□□□□ 0.33
H2AFXP16104 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.13■□□□□ 0.33
H2AFXP16104 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.13■□□□□ 0.33
H2AFXP16104 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.13■□□□□ 0.33
H2AFXP16104 FITM1-202ENST00000559294 800 ntBASIC17.13■□□□□ 0.33
H2AFXP16104 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
H2AFXP16104 MIR4492-201ENST00000581627 80 ntBASIC17.13■□□□□ 0.33
H2AFXP16104 AC005332.3-201ENST00000589904 676 ntBASIC17.13■□□□□ 0.33
H2AFXP16104 GPR32P1-201ENST00000601788 811 ntBASIC17.13■□□□□ 0.33
H2AFXP16104 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
H2AFXP16104 AC113410.3-201ENST00000623366 203 ntBASIC17.13■□□□□ 0.33
H2AFXP16104 AC010327.5-201ENST00000586923 3061 ntBASIC17.13■□□□□ 0.33
H2AFXP16104 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.13■□□□□ 0.33
H2AFXP16104 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2AFXP16104 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2AFXP16104 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2AFXP16104 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2AFXP16104 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.13■□□□□ 0.33
H2AFXP16104 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2AFXP16104 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
H2AFXP16104 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.12■□□□□ 0.33
H2AFXP16104 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2AFXP16104 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.12■□□□□ 0.33
H2AFXP16104 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
H2AFXP16104 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.12■□□□□ 0.33
H2AFXP16104 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.12■□□□□ 0.33
H2AFXP16104 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2AFXP16104 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.12■□□□□ 0.33
H2AFXP16104 AC009090.5-201ENST00000624886 2285 ntBASIC17.12■□□□□ 0.33
H2AFXP16104 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2AFXP16104 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
H2AFXP16104 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2AFXP16104 ABHD17AP1-201ENST00000358206 933 ntBASIC17.12■□□□□ 0.33
H2AFXP16104 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
H2AFXP16104 RBM17P1-201ENST00000453646 1190 ntBASIC17.12■□□□□ 0.33
H2AFXP16104 AC128676.1-201ENST00000454392 318 ntBASIC17.12■□□□□ 0.33
H2AFXP16104 RASA4DP-201ENST00000460726 1199 ntBASIC17.12■□□□□ 0.33
H2AFXP16104 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H2AFXP16104 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
H2AFXP16104 GCSHP2-201ENST00000560971 527 ntBASIC17.12■□□□□ 0.33
H2AFXP16104 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.12■□□□□ 0.33
H2AFXP16104 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
H2AFXP16104 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
H2AFXP16104 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2AFXP16104 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2AFXP16104 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2AFXP16104 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.12■□□□□ 0.33
H2AFXP16104 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
H2AFXP16104 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.12■□□□□ 0.33
H2AFXP16104 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.12■□□□□ 0.33
H2AFXP16104 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2AFXP16104 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2AFXP16104 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
H2AFXP16104 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
H2AFXP16104 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
H2AFXP16104 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
H2AFXP16104 AP000523.1-201ENST00000398242 1049 ntBASIC17.11■□□□□ 0.33
H2AFXP16104 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.11■□□□□ 0.33
H2AFXP16104 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.11■□□□□ 0.33
H2AFXP16104 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
H2AFXP16104 AL512604.3-201ENST00000569583 964 ntBASIC17.11■□□□□ 0.33
H2AFXP16104 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.11■□□□□ 0.33
H2AFXP16104 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms