Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MS4A1P11836 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MS4A1P11836 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MS4A1P11836 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.22■□□□□ 0.99
MS4A1P11836 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MS4A1P11836 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.22■□□□□ 0.99
MS4A1P11836 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
MS4A1P11836 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
MS4A1P11836 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC21.21■□□□□ 0.99
MS4A1P11836 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.21■□□□□ 0.99
MS4A1P11836 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC21.21■□□□□ 0.99
MS4A1P11836 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
MS4A1P11836 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 MRPL3P1-201ENST00000400109 1033 ntBASIC21.21■□□□□ 0.99
MS4A1P11836 CRYGEP-201ENST00000412192 528 ntBASIC21.21■□□□□ 0.99
MS4A1P11836 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 AL031432.2-201ENST00000566714 459 ntBASIC21.21■□□□□ 0.99
MS4A1P11836 AL928711.1-201ENST00000570165 459 ntBASIC21.21■□□□□ 0.99
MS4A1P11836 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
MS4A1P11836 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC21.21■□□□□ 0.99
MS4A1P11836 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
MS4A1P11836 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC21.21■□□□□ 0.99
MS4A1P11836 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MS4A1P11836 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
MS4A1P11836 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
MS4A1P11836 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC21.2■□□□□ 0.98
MS4A1P11836 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC21.2■□□□□ 0.98
MS4A1P11836 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC21.2■□□□□ 0.98
MS4A1P11836 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MS4A1P11836 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MS4A1P11836 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC21.2■□□□□ 0.98
MS4A1P11836 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MS4A1P11836 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MS4A1P11836 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.2■□□□□ 0.98
MS4A1P11836 AC009947.1-201ENST00000444350 727 ntBASIC21.2■□□□□ 0.98
MS4A1P11836 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.2■□□□□ 0.98
MS4A1P11836 IGHV3-22-201ENST00000520721 359 ntBASIC21.2■□□□□ 0.98
MS4A1P11836 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
MS4A1P11836 SLC25A6P4-201ENST00000586535 553 ntBASIC21.2■□□□□ 0.98
MS4A1P11836 AC021097.1-201ENST00000607902 574 ntBASIC21.2■□□□□ 0.98
MS4A1P11836 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.2■□□□□ 0.98
MS4A1P11836 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.2■□□□□ 0.98
MS4A1P11836 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.2■□□□□ 0.98
MS4A1P11836 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MS4A1P11836 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC21.2■□□□□ 0.98
MS4A1P11836 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MS4A1P11836 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
MS4A1P11836 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MS4A1P11836 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MS4A1P11836 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC21.2■□□□□ 0.98
MS4A1P11836 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC21.2■□□□□ 0.98
MS4A1P11836 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
MS4A1P11836 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC21.19■□□□□ 0.98
MS4A1P11836 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
MS4A1P11836 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC21.19■□□□□ 0.98
MS4A1P11836 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC21.19■□□□□ 0.98
MS4A1P11836 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC21.19■□□□□ 0.98
MS4A1P11836 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.19■□□□□ 0.98
MS4A1P11836 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
MS4A1P11836 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 PMS2P4-201ENST00000412466 1052 ntBASIC21.19■□□□□ 0.98
MS4A1P11836 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.19■□□□□ 0.98
MS4A1P11836 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.19■□□□□ 0.98
MS4A1P11836 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.19■□□□□ 0.98
MS4A1P11836 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.19■□□□□ 0.98
MS4A1P11836 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MS4A1P11836 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms